Pairwise Alignments

Query, 473 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score = 60.1 bits (144), Expect = 3e-13
 Identities = 80/386 (20%), Positives = 159/386 (41%), Gaps = 32/386 (8%)

Query: 78  IANLPHLAEAYGQDFASSASREIQRRLCANFLRSAETDLARLRDDCFLLWANDAFATGTV 137
           I +  +L ++ G  +     +++ +RL +  L      L R+  D F+L      AT  V
Sbjct: 432 IDHFKYLNDSLGHSYGDQVIKQVAKRLQS--LIDPNATLGRIGGDEFVLLLPSLTATSQV 489

Query: 138 RAGAS-VSRELETLLSELGAEPVRAKGITAMAQLHADWIEVRPPEQLGAAE----IELTL 192
            + A+ + R L T        P R  G      +    I + P + L A E    ++  +
Sbjct: 490 DSIATDIVRSLNT--------PFRIDGQEYTLSVSVG-ISIYPSDALRAEELMTHVDAAM 540

Query: 193 WTAQPFPDSGESR----ADGWRQRYRADMDVAVRVSEAVLAEGLSFGWQPVVHAGGIATI 248
           + A+   D G +R    ++   Q      ++   +  A+  E +   +QP V       I
Sbjct: 541 YRAK---DLGRNRFCYFSEDLEQELTKRHELVTLLRTAIDTEAIEVYYQPKVDLK-TKEI 596

Query: 249 FYREGRPRIAPGRGEPASLAPEVFLPCLQRLGLARAFDRLVMRRAMEALRL-----RPSA 303
              E   R+    G+   ++P  F+P  +  GL      ++++++  A +      RP  
Sbjct: 597 IGAEALARLYDPSGK--LISPLDFIPLAEETGLIHQLGEIILKQSCMAAKAWQKRGRP-L 653

Query: 304 HIGVRISAQSAKLDHWWASLLSALDDEYALASRLVIEIAGSGGLADLEAARDFCAQLQLR 363
            I V I+A+      +  S+   L+     +S L +E+  S  + D + A +    L   
Sbjct: 654 QIAVNIAAKQFTNPEFCDSVAKVLELTGLDSSFLELEVTESSLMYDFDEALNVLNTLSSL 713

Query: 364 GCRIALRDFGAGGDNLAAVQACRPDIVKLDASFLRRARSGAFGRECLQGMVSLCGHFATH 423
           G  IA+ DFG G  +L+ ++    + +K+D SF++         + ++ ++ L       
Sbjct: 714 GLSIAIDDFGTGYSSLSYLKFFPVNTLKIDQSFVKDMLGDEQSLDIVKAVIHLAKSLKLK 773

Query: 424 VVVDGVEREDDVHIALAAGAQWLQGY 449
           ++ +G+E  + +   +A   +  QGY
Sbjct: 774 LIAEGIEDAEQLQKLVALECEQGQGY 799