Pairwise Alignments

Query, 216 a.a., Transcriptional regulator, Crp/Fnr family from Variovorax sp. SCN45

Subject, 211 a.a., catabolite gene activator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 9/179 (5%)

Query: 11  YRRNAHVLVAGEWTDHIYCVANGLLRVVAPSGNDGMEVTTDFIRPDDFFLGPSLSEDRYQ 70
           Y   + ++ AGE +D +Y +  G + V+     +G E+   ++   DF     L E++ +
Sbjct: 25  YPAKSTLIHAGEDSDTLYYIVKGSVAVLIKD-EEGKEMILSYLNQGDFIGELGLFEEQAE 83

Query: 71  TKQGLIAALPSSVYRVPAAALRKLCAKHPEVALGLLGLAMKRMSGIRGQMRSVSSLTSED 130
               + A     +  +     ++L   +PE+   L+ L+ +    ++   + V +L   D
Sbjct: 84  RTAWVRAKQACEIAEISYKKFKQLIQVNPEI---LMKLSAQMAYRLQSTSQKVGNLAFLD 140

Query: 131 LVSRVLRQLTYLA--PAGAGRYDK---RITQSVIASYSGLSREVVNKTMRELEGKGLVR 184
           +  R+ + L +LA  P      D    +IT+  I    G SRE V + ++ LE + L++
Sbjct: 141 VAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLIQ 199