Pairwise Alignments

Query, 300 a.a., FIG00640418: hypothetical protein from Variovorax sp. SCN45

Subject, 286 a.a., YafY family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (358), Expect = 9e-39
 Identities = 90/281 (32%), Positives = 143/281 (50%), Gaps = 6/281 (2%)

Query: 17  LSWGLESRLQFIDFRLRWERRINRMDLTEHFGISVPQASLDISKYM-ELAPSNLTYDRSS 75
           + W L  R + I+    WE R+    L + FGI   QAS DI+ Y+ ++AP NL YD+  
Sbjct: 6   IRWDLLFRYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHL 65

Query: 76  KTYTAAQSFHPLYQRSSAQRYLAELLATKMGIVEPTASFIGSAPETDWAPSPWRTINEQT 135
           K Y  + SF P      A  YL  L  ++   V      +G    T   P   R I+ Q 
Sbjct: 66  KGYKPSDSFSPKLTSGHADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVT-RNISPQV 124

Query: 136 VEAVVRAIRQQESILVSYQSMTSLDESVRLLSPHALGNDGFRWHMRAFCHKRQRFSDFVL 195
           +  +V+AIR+++ + + Y S+   ++S R++SPH L     RWH+RA+C +   + DFVL
Sbjct: 125 LRPLVQAIREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYRDFVL 184

Query: 196 ARILRIDGFEATQVDSNQDS-HWQTVLTLVLAPHPDLPAAKKRVLELDYGMEDGEVKLPC 254
           +RI  I       +   +D   W T + + L P   L   ++ V+E DY M DG +++  
Sbjct: 185 SRIQGIPDINNNAIHGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVLRIAT 244

Query: 255 RQAFLYYTL--RRLGLHTKEAPDPLAQQITLKNRDEIQPYI 293
             + + Y L    + +H +++ +P  QQI L NRDE+  Y+
Sbjct: 245 NASLVRYVLDTYNIDIHVQKS-NPQGQQIVLGNRDELISYV 284