Pairwise Alignments

Query, 421 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Variovorax sp. SCN45

Subject, 426 a.a., endopeptidase Clp ATP-binding regulatory subunit (clpX) from Pseudomonas stutzeri RCH2

 Score =  584 bits (1505), Expect = e-171
 Identities = 297/419 (70%), Positives = 345/419 (82%), Gaps = 4/419 (0%)

Query: 4   KKGSSSEKTLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDELPAGEEAREARS 63
           + G  S K LYCSFCGKSQHEV+KLIAGPSVFICDEC+DLCN+IIR+E+   +    A  
Sbjct: 5   RNGEDSGKLLYCSFCGKSQHEVRKLIAGPSVFICDECVDLCNDIIREEVQEAQAESNAHK 64

Query: 64  DLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKGDDVELSKSNILLIGP 123
            LP P EI   LD YVIGQE AK++L+VAVYNHYKRL  ++K   ++VEL KSNILLIGP
Sbjct: 65  -LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQRDKK--EEVELGKSNILLIGP 121

Query: 124 TGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLLQSCNYEVERAQRGI 183
           TGSGKTLLA+TLAR+L+VPF +ADATTLTEAGYVGEDVENIIQKLLQ C+Y+VE+AQ GI
Sbjct: 122 TGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGI 181

Query: 184 VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFLQIDT 243
           VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT+ASVPPQGGRKHP Q+FLQ+DT
Sbjct: 182 VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDT 241

Query: 244 TNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSK-AQRSITEVFREVEPEDLIKFGLI 302
            NILFICGGAFAGLEKVI+ R+   GIGF A V+SK   + I E  R VEP+DL+KFGLI
Sbjct: 242 RNILFICGGAFAGLEKVIQGRSTQGGIGFNAEVRSKDPGKKIGEALRAVEPDDLVKFGLI 301

Query: 303 PELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLLQMEGVDLEIRPAALKAIARK 362
           PE VGR+PV+A+L EL E AL+QILTEPKNA+ KQ+ KL ++EGVDLE RP ALKAIA +
Sbjct: 302 PEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAIASR 361

Query: 363 ALARKTGARGLRSILEQSLIDTMFELPNATNVDKVVVEESTIDENKPPLLVYREAAKKA 421
           AL RKTGARGLRSILE  L+DTM+E+P+  +V KVV++ES I+    PLL+Y      A
Sbjct: 362 ALERKTGARGLRSILEGVLLDTMYEIPSQKDVSKVVIDESVIEGTSQPLLIYENTEPPA 420