Pairwise Alignments

Query, 558 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  167 bits (424), Expect = 7e-46
 Identities = 142/522 (27%), Positives = 235/522 (45%), Gaps = 46/522 (8%)

Query: 53  RYTYADCYARVCRSANALRALGVEPGDRVGILDWNSRRHFELYWSIPGLGAVMLQMNLRL 112
           R+TY +   R    A  L  +G++ GD +GI   N        ++   +G V++ +N   
Sbjct: 33  RFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAY 92

Query: 113 GPEDLGYVVDHSKVSYVCVDESL---------------LPLAESVAANS---PQIKGWI- 153
              +L YV+  S +  + + +S                L  ++    NS   P +K  I 
Sbjct: 93  KSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLKNVIY 152

Query: 154 VMTDKPLDQIKTTLKPLL-HY---EDLLAAADTKIDWPEIDETSAYSACYTTGTTGKPKG 209
           V  +K      TT   LL +Y   E L+ A         +D     +  YT+GTTG PKG
Sbjct: 153 VGQEKHRGMYNTTELMLLGNYVSDEKLIEAK------KGLDSDDVINMQYTSGTTGFPKG 206

Query: 210 VYYSHRGIYLHSTAMATNLGMTLDDCVMLITPMFHGQCWGLPQAATLLADKIVLPGRYVA 269
           V  +H+ I  +   +      T ++ + L  P+FH  C+G+      L            
Sbjct: 207 VMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFH--CFGIVLGVLALLTHGGTLVMLEI 264

Query: 270 EDTKPLVDAMIAEGVTIANGAPAIFQPMLQYIETMPVKPDFSRMR--MLSGATEPPLSMM 327
            D   ++ A+  E  T   G P +F  + ++   M    D S +R  +++G+T P  +M 
Sbjct: 265 FDPLLVLAAIQKEKCTAVYGVPTMF--IAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMK 322

Query: 328 IGFYDLTGAEVVHAYGATEATTLVTMNRLKSTLKKRLTEEEKWNLKRKQGLVLTGVDIRI 387
               D+   E+  +YG TEA+ + TM  +    +KR+            G  +   +++I
Sbjct: 323 KVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRV---------ESVGKAMPHCEVKI 373

Query: 388 LDADDKDLPHDGKSAGEICLRGPWITARYHDMPDSADRFLE-GGWWRSGDVGTVDENGYL 446
           +D +  +    G + GEIC RG  +   Y+ MP+     +E  GW  SGD+   DE+GY 
Sbjct: 374 IDPETGETLAPG-NVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYY 432

Query: 447 KVTDRIKDVIKSGGEWISSIDMENLLMGHPAVRDAAVVGIPHAKWQERPLALVVLRPGQQ 506
           K+  RIKD+I  GGE I   ++E  L   P + DA VVGIP  K+ E   A V+ + G +
Sbjct: 433 KIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYE 492

Query: 507 ATQEQLQEHLTSAFAKWQLPDQVLFVEAIPKTSVGKLDKKRI 548
             +E +++      A++++P  V  VE  P T+ GK+ K ++
Sbjct: 493 IKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKL 534