Pairwise Alignments

Query, 349 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 394 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  108 bits (271), Expect = 2e-28
 Identities = 96/360 (26%), Positives = 149/360 (41%), Gaps = 31/360 (8%)

Query: 5   LQLPLHGVRVVEFEGIGPGPLAARMLVDMGAEVIALARAEQAAGA--------------- 49
           ++ PL G+RV+E   I  GP   + L D+GA+VI   + E  AG                
Sbjct: 1   MEAPLKGIRVLELARILAGPWIGQTLADLGADVI---KVESPAGDDTRTWGPPFVTGEDD 57

Query: 50  QRLGGAVENPLHRGKKVEVIDLKSPGGKARALELIAQADALIEGFRPRVMERLGFGPADC 109
           +RL  A  +  +RGK+  V+D  +  G+     L AQ+D L+E F+   + + G      
Sbjct: 58  ERLDAAYFHACNRGKRSVVLDFTTAEGQEAVRRLAAQSDVLLENFKVGGLAKYGLDYESL 117

Query: 110 AALNPRLVYGRMTGWGQDGPLAQAAGHDLNYVALTGLLSLSAHRGQAPIVPPSVLGDGAG 169
           + +NPRL+Y  +TG+GQDGP A  AG+D     ++G++ L+    + P        D   
Sbjct: 118 SKVNPRLIYCSVTGFGQDGPYAHRAGYDYIVQGMSGIMDLTGEPDREPQKIGVAFADIFT 177

Query: 170 ALGMAFGVACALVDARATGHGRVVDAAIIDIVAMLGTLVHWIRANGQIDGAQPSPFHDS- 228
            L     V  AL     TG G+ +D A++D   M G L +    N  + G  P    ++ 
Sbjct: 178 GLYGVIAVQAALAQRERTGEGQQIDMALLD--CMTGVLANQ-ALNFLVSGKAPRRLGNAH 234

Query: 229 ---PFYDVYACADGGFISLAAVEPAFHALLLSKLGLADVNPAEQYDAAT-----WPALKE 280
                Y V+  +DG  I     +  F       LG  D+    +Y           +L  
Sbjct: 235 PNIAPYQVFPTSDGHLIVAVGNDRQF-VKFCELLGRPDLAADARYRTNADRVQHRDSLTP 293

Query: 281 RIAAFIRSQPRAHWCALLEGSDACFAPVLSLAEAVRHPHNAARGIYQITPSGAIEAAPAP 340
            +AA      R      LE S     P+ ++A+    P    R +   TP     A  +P
Sbjct: 294 ELAAETAKYERDTLLEKLEASGVPGGPINTVADVFADPQIVHRQMRVDTPHTGAAAGTSP 353