Pairwise Alignments

Query, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 596 a.a., Acyl-CoA dehydrogenases from Pseudomonas stutzeri RCH2

 Score =  476 bits (1225), Expect = e-138
 Identities = 275/596 (46%), Positives = 358/596 (60%), Gaps = 16/596 (2%)

Query: 4   YIAPLREMLFAMKEVGGLDAICAQPDHEETTPDLVEAILQEAANYAAGVLDPLNRPGDVQ 63
           Y APLR+M F + E+    A C    +     +L++ +L+EAA Y  G + PLNR  D +
Sbjct: 3   YKAPLRDMRFVLHELFDATAHCELLGNG-LDRELIDGVLEEAARYTGGEIAPLNRNSDEE 61

Query: 64  GARWHDGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKSSNLAF 123
           G    +G V    GF EA+  + +NGW  M   TE+GGQG P LV+    EM   ++L+F
Sbjct: 62  GVTLENGEVRTPQGFVEAYRQYVDNGWASMTGPTEYGGQGFPQLVACNFHEMLMGASLSF 121

Query: 124 SLCQMLTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRSRAVHE 183
            +   LT GAV A+  HGSD L+  +L  +V G W+GTM LTEPQAG+DLA LR+RA  +
Sbjct: 122 RIYSGLTEGAVLALYKHGSDELKNAYLEKLVSGSWSGTMCLTEPQAGTDLALLRTRAEPQ 181

Query: 184 GD-HYHVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGTLG 242
            D  Y VSG+KIFI+ GEHDM+ENIVHLVLARLPDAP GVKGISL L PK++ N DGTLG
Sbjct: 182 ADGSYKVSGSKIFISGGEHDMSENIVHLVLARLPDAPAGVKGISLLLVPKFIANADGTLG 241

Query: 243 ERNDLACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNVGL 302
           ERN L+C ++EHKMGI G+ T  M+F    GA G++VG P+QGLACMFTMMN AR  VGL
Sbjct: 242 ERNALSCGAVEHKMGIKGAATCVMNF---DGATGWVVGAPNQGLACMFTMMNDARFQVGL 298

Query: 303 EGVGISERAYQRARAYALERVQGKPLI------SGSTAIAGHPDVRRMLMDMKARTEAMR 356
           +G+GI+E+AYQ + AYA ER+Q + L         +  I  HPDVRRML+  K   E  R
Sbjct: 299 QGLGIAEQAYQGSLAYARERLQSRGLAGVQHPDKPADPIIVHPDVRRMLLTQKTLVEGSR 358

Query: 357 ALAYFCAGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGMGY 416
            LA +CA Q+D   GH +   R  A     LLIP+VK + TD  Q + S GVQV+GG GY
Sbjct: 359 MLAAYCARQLDLEHGHPEPSHRKAASTRAALLIPIVKAFFTDMGQEVASLGVQVYGGHGY 418

Query: 417 VEETGASQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDGDARRLVES 476
           + E G  Q MRD+RIT +YEGT GIQA D I RKL  +GG  L AL         R ++ 
Sbjct: 419 IREWGMEQLMRDSRITQLYEGTNGIQALDYIRRKLLGDGGAELSALQAEFSEICDRQIDR 478

Query: 477 PDAVLAQIGRALAAAAQALDEAVDWLLAHDGQPAQCAAGAVPFLRLAGTVI--GGWLSAR 534
           P A+     +  A   +  +   + + A    P +  A +V FL+ +  V+  G WL A 
Sbjct: 479 P-ALHDMASKVQARIGEWRELTAEIIAATGRDPQEIGAVSVDFLQYSAYVLLAGLWLQA- 536

Query: 535 MAEAATAQLAAGAGDAGFLGTKRATASHYAAHVLVQAPMLRDIVTGGAASTLALAD 590
            A  A   L  G+ +  F   K A+A  Y   VL +A   R+ + GGAA  +AL +
Sbjct: 537 -AGRAQDALEQGSAEEAFYQAKLASADFYLRRVLPRASAHREAIQGGAACLMALPE 591