Pairwise Alignments

Query, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 600 a.a., Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region from Pseudomonas syringae pv. syringae B728a

 Score =  335 bits (860), Expect = 2e-96
 Identities = 221/591 (37%), Positives = 304/591 (51%), Gaps = 9/591 (1%)

Query: 9   REMLFAMKEVGGLDAICAQPDHEETTPDLVEAILQEAANYAAGVLDPLNRPGDVQGARWH 68
           R + F + EV   + +  +    E + +  +A L  A   A     P NR  D    R+ 
Sbjct: 9   RNLAFELYEVLDAEGLTRRERFAEHSRETFDAALGTARVIAEKYFAPHNRKADENEPRYE 68

Query: 69  DGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKSSNLAFSLCQM 128
            G        + A  +F   G+       + GG  LPTL+S A    ++++N+  +    
Sbjct: 69  KGEAILIPEVKPAVDAFIAAGFLNASRDFDVGGMQLPTLLSQACFAHFQAANVGTTSYPF 128

Query: 129 LTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRSRAVH-EGDHY 187
           LT+GA   I   GSD  ++RFL PM+EGR+ GTM LTEP AGS L+ +R+RA   +   Y
Sbjct: 129 LTMGAANLIESFGSDEQKQRFLQPMIEGRFFGTMALTEPHAGSSLSDIRTRAEPADNGTY 188

Query: 188 HVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGTLGERNDL 247
            + GNKIFI+ G+H ++ENIVHLVLA+LPDAP GVKGISLF+ PK+LVN+DG+LG+RND+
Sbjct: 189 RLRGNKIFISGGDHSLSENIVHLVLAKLPDAPGGVKGISLFIVPKFLVNEDGSLGKRNDV 248

Query: 248 ACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNVGLEGVGI 307
               + HKMG  G+ + +++FGD+G  +GYLVG+PH GL+ MF MMN AR+ VGL  V +
Sbjct: 249 LLAGLFHKMGWKGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVML 308

Query: 308 SERAYQRARAYALERVQG-----KPLISGSTAIAGHPDVRRMLMDMKARTEAMRALAYFC 362
               Y  +  YA +R QG     K   S    I  H DVRRML+  KA  E    L  + 
Sbjct: 309 GYAGYLYSLDYARDRPQGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYA 368

Query: 363 AGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGMGYVEETGA 422
           +   D          R  A  L+ LL PVVK W ++         +QV GG GY  E   
Sbjct: 369 SRLFDDTQTGETEDVRKHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGHGYTREYPV 428

Query: 423 SQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDGDARRLVESPDAV-L 481
            Q+ RD R+  I+EGT GIQ+ DL+GRKLA+ GG  LK LL  I     R       V L
Sbjct: 429 EQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGTGLKQLLRLIANTCERAQAHESLVEL 488

Query: 482 AQIGRALAAAAQALDEAVDWLLAHDGQPAQCAAGAVPFLRLAGTVIGGWLSARMAEAATA 541
            Q    L A  QA+   +   LA  G+     A +  +L+  G  + GW     A  A  
Sbjct: 489 RQPLEQLIARLQAVTLGLLGDLA-QGRITSTLANSALYLKAFGHTVIGWRWLEQAIRAEE 547

Query: 542 QLAAG-AGDAGFLGTKRATASHYAAHVLVQAPMLRDIVTGGAASTLALADD 591
            L  G + D+ F   K   A ++    +        I+     + LA+ DD
Sbjct: 548 GLGKGNSADSDFYHGKLQAARYFLTWEVPGCHHELTILENRDDTCLAMRDD 598