Pairwise Alignments

Query, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 590 a.a., acyl-CoA dehydrogenase from Phaeobacter inhibens DSM 17395

 Score =  476 bits (1225), Expect = e-138
 Identities = 259/588 (44%), Positives = 360/588 (61%), Gaps = 11/588 (1%)

Query: 4   YIAPLREMLFAMKEVGGLDAICAQPDHEETTPDLVEAILQEAANYAAGVLDPLNRPGDVQ 63
           Y AP+R+M+F +  +     + A   + E       A L+E   +   ++ PL+  GD  
Sbjct: 3   YEAPIRDMMFNLDHLSQWPQVSALEKYGEIDRTDARAALEELGRFCTDLIAPLSAVGDTT 62

Query: 64  GARWHDGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKSSNLAF 123
           GAR    +V   + F  A+A F + GW  +    + GG GLP +V  A  E+  +++++F
Sbjct: 63  GARLDGDKVVLPEAFAAAYAQFVDMGWQSLAHPVDHGGMGLPRVVGAAATEILNAADMSF 122

Query: 124 SLCQMLTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRSRAVHE 183
            LC +LT GA++A+   G++A +  +L P+V GRWTGTMNLTEPQAGSDL  +R +A   
Sbjct: 123 GLCPLLTDGAIDALQLSGTEAQKELYLRPLVSGRWTGTMNLTEPQAGSDLGRVRCKAEPR 182

Query: 184 GD-HYHVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGTLG 242
            D  Y VSG KIFIT+G H+++ENI+HLVLAR P AP G +G+SLFL PK+LV+ DGT G
Sbjct: 183 ADGSYGVSGTKIFITYGAHELSENIIHLVLARTPGAPDGHRGLSLFLVPKFLVDQDGTPG 242

Query: 243 ERNDLACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNVGL 302
           +RN + C SIEHK+G+  SPTA + + +   A GYL+GE ++GL  MFTMMN AR  VG+
Sbjct: 243 DRNSVNCVSIEHKLGVRASPTAVLEYDN---ATGYLIGEENRGLEYMFTMMNAARFAVGV 299

Query: 303 EGVGISERAYQRARAYALERVQGKPL---ISGSTAIAGHPDVRRMLMDMKARTEAMRALA 359
           +GV +SERAYQ A +YA ERVQG+ +      +TAI GHPDVRRM++ M+A  E  R+L+
Sbjct: 300 QGVAVSERAYQHALSYAKERVQGQAIGLAPDKTTAIIGHPDVRRMVLRMRALVEGGRSLS 359

Query: 360 YFCAGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGMGYVEE 419
              AG +D  + + D   RA+   +   L+P+VK +C++ A  + S GVQ+HGGMG++EE
Sbjct: 360 MAAAGWLD-LSQNGDDDIRAETAPVAEFLVPLVKAFCSERAVEVASLGVQIHGGMGFIEE 418

Query: 420 TGASQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDGDARRLVESPDA 479
           TG +Q  RDARI  IYEGTT IQANDL+GRK+ R+ G+T +     I  D    +++  A
Sbjct: 419 TGVAQFYRDARILPIYEGTTAIQANDLLGRKVLRDAGQTARRFSAMI-ADTEAALQTGSA 477

Query: 480 VLAQIGRALAAAAQALDEAVDWLL-AHDGQPAQCAAGAVPFLRLAGTVIGGWLSARMAEA 538
            L  I   L  A  A D ++ WLL      P     G+VPFL L GT+  GW  AR A A
Sbjct: 478 KLQDIAARLGEARAAFDASLAWLLETAPNDPRAAFGGSVPFLNLTGTLAAGWQLARGARA 537

Query: 539 ATAQLAAGAGDAGFLGTKRATASHYAAHVLVQAPMLRDIVTGGAASTL 586
           A A+L  G  +  F+  K  T   +A H+LV+    R  +  GA S L
Sbjct: 538 AEAELQRG-NETDFMAQKITTVQIFAHHILVECESDRARIMTGATSLL 584