Pairwise Alignments

Query, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 593 a.a., putative acyl-CoA dehydrogenase from Phaeobacter inhibens DSM 17395

 Score =  435 bits (1119), Expect = e-126
 Identities = 241/597 (40%), Positives = 351/597 (58%), Gaps = 16/597 (2%)

Query: 4   YIAPLREMLFAMKEVGGLDAICAQPDHEETTPDLVEAILQEAANYAAGVLDPLNRPGDVQ 63
           Y AP+++  F +  V  +      P ++E   D   A+L+EA   ++ VL PLN  GD++
Sbjct: 4   YTAPIKDTQFILHNVLKISQ-SGIPGYDELDADFTNAVLEEAGKISSEVLHPLNTVGDIE 62

Query: 64  GARWHDGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKSSNLAF 123
           G R  +G V    GF+ A+    E GW G+    ++GGQ +P ++ TAV EM+ ++N AF
Sbjct: 63  GCRLENGVVYTPTGFKAAFEQVKEGGWTGLDMPEQYGGQNMPYVMGTAVGEMFSAANQAF 122

Query: 124 SLCQMLTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRSRAVHE 183
           ++ Q LT GA  AI  HG+DA +  +L  MV   WTGTMNLTEP  G+DL  +R++A  +
Sbjct: 123 TMYQGLTHGAASAILAHGTDAQKDTYLPKMVSCEWTGTMNLTEPHCGTDLGLMRTKAEPQ 182

Query: 184 GD-HYHVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGTLG 242
            D  Y ++G KIFI+ G+HDMA+NI+HLVLA++P  P G+KG+SLF+ PK++V D G+LG
Sbjct: 183 DDGSYKITGQKIFISSGDHDMADNIIHLVLAKIPGGPDGIKGVSLFIVPKFIVKDGGSLG 242

Query: 243 ERNDLACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNVGL 302
           +RN ++   IE KMGIHG+ T  M++     A GYL+G  H+G+  MFTMMN ARL VG+
Sbjct: 243 DRNGVSVGKIEEKMGIHGNSTCVMNY---DSATGYLLGTEHKGMRAMFTMMNEARLGVGM 299

Query: 303 EGVGISERAYQRARAYALERVQGKPLI------SGSTAIAGHPDVRRMLMDMKARTEAMR 356
           +G+  +E AYQ A  YA +R+QG+ +         +  +  HPD+RR LMD K+  E  R
Sbjct: 300 QGLAQAEAAYQNALEYAKDRLQGRDVTGVKNPDGPADPLIVHPDIRRNLMDQKSFAEGAR 359

Query: 357 ALAYFCAGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGMGY 416
           A   + A  +D+    A   E   A  L+ LL PV+KG+ TD    +T    Q++GG GY
Sbjct: 360 AFILWGAKMIDQ----AHRAEDKDADGLISLLTPVIKGFLTDQGYDMTVQAQQIYGGHGY 415

Query: 417 VEETGASQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDGDARRLVES 476
           +EE G SQ+ RDARI  IYEG  G+QA DL+GRKLA++GG+ + A    +    +   + 
Sbjct: 416 IEEWGMSQYTRDARIAMIYEGANGVQALDLVGRKLAQDGGKHVMAFFEMVKNFCKENGDI 475

Query: 477 PDAVLAQIGRALAAAAQALDEAVDWLLAHD-GQPAQCAAGAVPFLRLAGTVIGGWLSARM 535
            +    +    L AA++ L  A  + + +    P    +G+  F+ + G V  G + A M
Sbjct: 476 SEGYSKEFIEPLKAASKDLQAAGMYFMQNGMTNPNNALSGSYDFMHMFGHVCLGLMWAEM 535

Query: 536 AEAATAQLAAGAGDAGFLGTKRATASHYAAHVLVQAPMLRDIVTGGAASTLALADDQ 592
           A+AA A+L AG+ DA F  TK AT  +Y A  L    +    +  G  + +ALA DQ
Sbjct: 536 AKAAQAELDAGSSDAAFYETKIATGRYYMARQLPATALHLSRIQTGGDTVMALAADQ 592