Pairwise Alignments

Query, 345 a.a., Conjugative transfer protein TrbB from Variovorax sp. SCN45

Subject, 474 a.a., Flp pilus assembly protein, ATPase CpaF from Pseudomonas stutzeri RCH2

 Score =  161 bits (408), Expect = 3e-44
 Identities = 106/303 (34%), Positives = 172/303 (56%), Gaps = 21/303 (6%)

Query: 24  MGPLIAAALEDPDVVEIMLNPDRTLWVDRLSTGRAPMGVELSEADGERIIRLV---AAHV 80
           +GPL    L D  V +I++N   +++V+R    +     ++   D + ++ ++    + +
Sbjct: 117 LGPL-EPLLADGTVSDILVNGHASVYVERHGKLQR---TDVRFRDDQHLLNIIDRIVSSL 172

Query: 81  GTEVHRGQPLLTAELPETGERFEGILPPAA-PGPAFALRKRAFGVIPLSRYIEDGMMTAA 139
           G  +    PL+ A L + G R   I+PP A  GP+ ++R+ A  ++     +E G +T A
Sbjct: 173 GRRIDESSPLVDARLKD-GSRVNAIIPPLAIDGPSLSIRRFAVDLLSAESLVEMGTLTPA 231

Query: 140 QAGLLVRAVRERQNILIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHV 199
            A +L   VR R N+L++GGT TGKTT+ N +L+      +R++ +ED+ ELQ      V
Sbjct: 232 IALVLKAIVRGRLNVLVSGGTGTGKTTMLN-VLSSFIPHNERIVTIEDSAELQLQQPHVV 290

Query: 200 PLRTR------QGVVSMTELVRSSMRLRPDRVIVGEVRGAEALDLIKVWGTGHPGGIATI 253
            L TR      +G ++  ELVR+S+R+RPDR+++GEVRG EALD++    TGH G I TI
Sbjct: 291 RLETRPANIEGRGEINQRELVRNSLRMRPDRIVIGEVRGPEALDMLAAMNTGHDGSITTI 350

Query: 254 HAGSALGALLRLEQLI-LEVAENPPRAL---IAEAVNVVIHI-AGRGRKRRIESIARVVG 308
           HA S   AL R+E ++ +  A  P +AL   IA A++VV+ +      KRR+ S+  + G
Sbjct: 351 HANSPRDALGRIENMVSMSGATFPIKALRQQIASAIDVVLQLERHEDGKRRLVSVQEING 410

Query: 309 FDG 311
            +G
Sbjct: 411 MEG 413