Pairwise Alignments

Query, 127 a.a., Integration host factor alpha subunit from Variovorax sp. SCN45

Subject, 90 a.a., DNA-binding protein HU-alpha from Vibrio cholerae E7946 ATCC 55056

 Score = 63.2 bits (152), Expect = 9e-16
 Identities = 33/89 (37%), Positives = 49/89 (55%)

Query: 18  LTKAHLADLLFEQIGLNKRESKDMVEAFFELVANSLIEGTDVKISGFGNFQIRVKAPRPG 77
           + K  L D + E+  L K ++K  +EA    V  +L +G  V++ GFG F++  ++ R G
Sbjct: 1   MNKTQLIDFIAEKADLTKVQAKAALEATLGAVEGALKDGDQVQLIGFGTFKVNHRSARTG 60

Query: 78  RNPRTGEAIPIGERRVATFHASAKLKEQI 106
           RNP+TGE I I    V  F A   LK+ I
Sbjct: 61  RNPKTGEEIKIAAANVPAFVAGKALKDAI 89