Pairwise Alignments

Query, 320 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Variovorax sp. SCN45

Subject, 348 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  113 bits (282), Expect = 8e-30
 Identities = 88/321 (27%), Positives = 146/321 (45%), Gaps = 13/321 (4%)

Query: 1   MKIDVLALDGVFDTGLSTVLDVFTTANELAAMLQLDVAPFEVVVAGMRKRVRTAQGFAVP 60
           ++I ++   GV    +  ++D+F  A+  AA    +   F  V    + +V    G  V 
Sbjct: 29  IEIGIVLFPGVQLAAVHGLIDLFGVADRFAAQHYKEEGVFLQV---SQWQVEGPSGTPVR 85

Query: 61  VARTL-EAGAADWLIVPALGCKMPETLEPALQRADVRDACSALRERTSKGAHIAAACIGT 119
           V     EAG +  +++      MP  L   +   +       L      G  + + C G 
Sbjct: 86  VGEKAGEAGGSPTVLL------MPPRLGTQVSSQEAAPFVDWLLGHHRAGTTLCSVCGGA 139

Query: 120 FVLAEAGVLDHQKATTTWWLATLFRQRYPAVQLEDSRMLVSSSHLVTAGAALSHVDMALW 179
           F+LAE G+L  +  TT W  A LFR+R+P   L+  R+++    +++AG  ++ +D+ L 
Sbjct: 140 FLLAETGLLAGRSVTTHWDHADLFRRRFPDAHLDIDRLVIDDGDIISAGGLMAWIDLGLK 199

Query: 180 IV-RQASPELATLVARYLIVDSRPSQSAY--VISDHLSHSDPLVERFERWARGRLALGFS 236
           +V R   P +    A YL+VD    +  Y    S +L+H D  V + + W +   A   +
Sbjct: 200 LVDRFLGPVIMAETAHYLLVDPPGREQRYYSAFSPNLTHGDAPVLKVQHWLQATGAKDTA 259

Query: 237 LDEAAQAAGTSKRTLARRMQQVLGKSPLSYVQDLRVERAVHLLKTSDKSLEQIAGMVGYA 296
           L      +G  +RT  RR ++  G + + Y Q LRV RA  +L+ S   +E IA  VGY+
Sbjct: 260 LASLVLRSGLEERTFLRRFRKATGFTAIDYCQRLRVGRAREMLQFSTLPIEAIAWEVGYS 319

Query: 297 DGVTLRTLLRQRLGRGVREVR 317
           D    R +  +  G    E R
Sbjct: 320 DPGAFRKIFIRVTGLTPGEYR 340