Pairwise Alignments

Query, 241 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 258 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  111 bits (277), Expect = 2e-29
 Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 14  TGYHAHEDGQLFALREGLQVIETPSGRWVQPPGWIGWIAPRCAHAAQSFGPTAGWSLHID 73
           +G H+H   QL    +G   I       V PP    WI P C H+          SL+  
Sbjct: 31  SGMHSHAKAQLLYAPQGCMTITLDGLHCVLPPTRAAWIPPACRHSVVMNRVVDYRSLYFA 90

Query: 74  SQAAAVLPDGPHVFAVTPLVLGLVDRLT--SLDASAGSLDARRARLVGVLIDELAASERL 131
            Q    + +   +  VTPL+  LV+R+     D SA ++         +  +EL+ ++  
Sbjct: 91  PQLTGSIANRIQILEVTPLLQALVERMAFWPWDKSAMAM----VNTYQLFFEELSQAKES 146

Query: 132 SLHLPMPQDKRLAMMAAALANDPSLPDTIDDWADRIGVARRTLTRRFAAETGLSFAQWRQ 191
            L LPMP D+RL    A L   P     +     ++G + +T++R F  +TG+ +  WRQ
Sbjct: 147 HLVLPMPSDRRLQTWLAELQRAPWDVPPLKQLGQQLGASSKTISRIFTRQTGMPYQNWRQ 206

Query: 192 QARLLKAVELLSLKEPVTVVALTVGYNSVSAFIEAFRKHFGRTPSRFFEP 241
           Q RL +A+ LL+    V  VA  + ++S SAFI  F++H G TP ++ +P
Sbjct: 207 QWRLQQAIALLASGYQVNDVAYRLAFSSDSAFIAFFKQHTGSTPLQYLQP 256