Pairwise Alignments

Query, 339 a.a., Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) from Variovorax sp. SCN45

Subject, 322 a.a., Substrate-binding region of ABC-type glycine betaine transport system from Pseudomonas syringae pv. syringae B728a

 Score = 61.2 bits (147), Expect = 3e-14
 Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 50/344 (14%)

Query: 5   TSLIARGLLALAFVACGATALATGNDLPGKGVTVLPLKSSLAEEAFQTLLVMRALEKLGY 64
           T+L++ GLLA A  +  A    +G  +   G+          E A     V++ +   GY
Sbjct: 9   TTLVSAGLLASAGASQAAGWCESGKPVKFAGLNW--------ESAMLLTDVLQVILDKGY 60

Query: 65  --TVEPMKDLEPATEHLAIANGDATFMTNHWSLLHADFYKNSGGDAKLWRKGVYSDGAVQ 122
             TV+ +     A E+ A+   D       W +  ++ +  +    K+   G    GAV+
Sbjct: 61  GCTVDALPGNSIAMEN-ALGTNDIQIFAEEW-VGRSEVWNKAAAAGKVVGVGAPIVGAVE 118

Query: 123 GYLIDRKT----------AEQYGITSIAQLKDPAIAKLFDADGDGKADLTGCNPGWGCEL 172
           G+ + R            A+   + SI+ L   + A   D +  GK     C  GW CEL
Sbjct: 119 GWYVPRYVIEGDAKRKLEAKAPNLKSISDLAQYS-AVFKDQEEPGKGRFYNCPAGWTCEL 177

Query: 173 AIENHLTAYQLRDTVTH-KQGSYAALMADTIARFKQEKPVLYYTWTPYWVSAVLRPGADV 231
                L +Y L    T+ + G+  AL A  ++ +K+ +P+L Y W+P      L    D+
Sbjct: 178 ENSEMLKSYGLESKYTNFRPGTGPALDAAILSSYKRGEPILTYYWSP----TPLMGQVDL 233

Query: 232 VWLQVPFSSSQGDAGNVDTQLPNGKNYGFQANQEQIVANRAFVEKNPAAGKLFEVMKLPI 291
           V L+       G    +D                ++  ++ F ++ P    + E + LPI
Sbjct: 234 VRLE----EKAGVNKTIDI---------------KVGVSKVFHDEAPELVAILEKVNLPI 274

Query: 292 SDINAQNLRMSQGANTQQDVERHTDGWIKAHQELFDGWIAQARA 335
             +N QNL   + A  + +  +    ++K H E++  W+++  A
Sbjct: 275 DLLN-QNL--GRMAKERIESPKLAKIFLKEHPEVWHKWVSEDAA 315