Pairwise Alignments

Query, 339 a.a., Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) from Variovorax sp. SCN45

Subject, 314 a.a., amino acid-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score = 56.6 bits (135), Expect = 8e-13
 Identities = 70/340 (20%), Positives = 121/340 (35%), Gaps = 52/340 (15%)

Query: 10  RGLLALAFVACGATALATGNDLPGKGVTVLPLKSSLAEEAFQTLLVMRALEKLGYTVEPM 69
           R  L  A +A    A A   DL      V+ +    + +A   +L +   +K     E +
Sbjct: 5   REFLCAAALALAVAAPAAAADL------VIAMPPWPSGQAAANILKLGIAKKFSLEAE-V 57

Query: 70  KDLEPATEHLAIANGDATFMTNHWSLLHADFYKNSGGDAKLWRKGVY--SDGAVQGYLID 127
           ++L   T  + +  G+       W     +  +       +  KGV   S+ AV  +   
Sbjct: 58  RELGTLTAFIGLEKGEVDIQPEVWRPNFDELVRKF-----VTEKGVVTLSERAVPAWQGI 112

Query: 128 RKTAEQYG-ITSIAQLKDPAIAKLFDADGDGKADLTGCNPGWGCELAIENHLTAYQLRDT 186
             T E    I S+A L DPA  K+ D DGDG+ ++      W            Y     
Sbjct: 113 CATPEAAATIKSVADLGDPAKTKILDTDGDGRGEMWIGAAEWLSTGIERARAAGYGYAAN 172

Query: 187 VTHKQGSYAALMADTIARFKQEKPVLYYTWTPYWVSAV-----------------LRPGA 229
           +T  +      MA   A     +P+++Y + P+ V  +                 + P  
Sbjct: 173 LTLVEAKEEVAMAAVDAAIATARPMVFYCYAPHHVFKLHQISRLEEPPHDPAKWKIAPPN 232

Query: 230 DVVWLQVPFSSSQGDAGNVDTQLPNGKNYGFQANQEQIVANRAFVEKNPAAGKLFEVMKL 289
           D +W+    +++  DAG                 Q QI    AF +K+P   +  + +  
Sbjct: 233 DPLWVSKSSAATAWDAG-----------------QFQIGYATAFAKKHPEVAQFLQKVDF 275

Query: 290 PISDINAQNLRMSQGANTQQDVERHTDGWIKAHQELFDGW 329
              ++ A +  +        D  R    W+++H E  DGW
Sbjct: 276 SPDEVTAMSYALEVERQAPADYARK---WVESHAERIDGW 312