Pairwise Alignments

Query, 257 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 281 a.a., aliphatic sulfonate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  127 bits (318), Expect = 3e-34
 Identities = 72/239 (30%), Positives = 129/239 (53%), Gaps = 8/239 (3%)

Query: 16  LILMLLVLWDLAIRLFKIPAYLIPPPWEVVKQLVAEWPHL----LAESWKTTLATLG-GF 70
           L++  L LW  A     I   + P    ++  L   W  +    L +    +L   G  F
Sbjct: 41  LLIAFLALWQAASTAGWINPAVFPSVGAILSAL---WTGISGGALLDDIAISLQRSGTAF 97

Query: 71  GLTILIGIPIAMVIAYSRVVESYVYPLLVFSQSIPKVAIAPLFVVWFGFGIFPKVISAFL 130
              +++ IP+ +++   R +E+ + P+L   +    +A+ P+F++  G G   KV   F 
Sbjct: 98  VGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLGEASKVFVIFW 157

Query: 131 LGFFPVVVSTVMGFKSVEPDMLDLSRSMGASRLQTFFKISLPQALPQIFSGLKVSVTLAV 190
              FP+++ST+ G K V+  +++++R  GASRL  F ++ LP A+P IF GL++S T A+
Sbjct: 158 ATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIFVGLRLSATTAL 217

Query: 191 VGAVVGEFVGSNSGIGYVLQVANGNFDLPLMFAALVVLSSIGVILFVAVDLVERVMIPW 249
           +  +  E +G+N GIG+ +  A  NF +PLMFAA+ +L+ +G++   A+   +R +  W
Sbjct: 218 LLLIASEMIGANKGIGFQVMNAQYNFQIPLMFAAIFILAGLGLVSNYALVFAQRRLCRW 276