Pairwise Alignments

Query, 333 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 328 a.a., putative thiamine biosynthesis protein from Phaeobacter inhibens DSM 17395

 Score = 77.0 bits (188), Expect = 6e-19
 Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 15/269 (5%)

Query: 5   LPSLLAAAALATFAIAPAQAQGDKPKDKVTLMLNWYLYSEHAPFFLGKEKGFYADEGIDL 64
           + +LL AAA+A  A + AQA      D+V L L W   ++ A +++  ++GFY  E +D+
Sbjct: 1   MKTLLTAAAMALGAASVAQAA-----DEVKLQLKWVTQAQFAGYYVALDQGFYEAEDLDV 55

Query: 65  DIQEGRGSAVTAQAVAAKSATFGYIDVTTMIKAAAKGAPLKSTGVLFQVSPMSVMGFSEK 124
            I  G       Q +A   A      +   + A  KG PL +    ++ S M +  + + 
Sbjct: 56  TILPGGPDIAPTQVIAGGGADVTVEWMPAALAAREKGLPLVNIAQPYKSSGMMLTCWKDT 115

Query: 125 NIKTPKDIIGKTVAV----TPGDSMSQMWPLFLKVNDIKPDQVKIVSGDGQTKLNAVTNG 180
            I  P+D+  +T+ V         MS M  L +         V+++       ++ +   
Sbjct: 116 GIAAPEDLANRTLGVWFFGNEFPFMSWMSQLGISTEGKGEKGVEVLKQG--FNVDPLLQR 173

Query: 181 QADLLLGYVMDQAIKLQDATGKP--VTPIRFADSGVNQISSGIITNKNLLTENP--DLVK 236
           QAD +     ++  ++ DA   P  +   ++ D GV  +  G+   +  L +    D ++
Sbjct: 174 QADCISTMTYNEYWQVIDAGVAPDELISFKYEDQGVATLEDGLYVLEENLNDPAFVDKMQ 233

Query: 237 RFMRASTKAAEAAEKSPEAAVDAMLKANA 265
           RF+RAS K  + AE++P+ A + +L  +A
Sbjct: 234 RFVRASMKGWKWAEENPDNAAEIVLDNDA 262