Pairwise Alignments

Query, 259 a.a., Hydroxymethylpyrimidine ABC transporter, ATPase component from Variovorax sp. SCN45

Subject, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  221 bits (562), Expect = 2e-62
 Identities = 107/244 (43%), Positives = 160/244 (65%), Gaps = 3/244 (1%)

Query: 4   VNLIEARGVSKIYQSKDGPVESLKPIDFAIKEGEFVSVVGPSGCGKSTLLKMVAGLLPIS 63
           ++++E + + K + +    + ++  +D ++   EFVS+VGPSGCGKST+L+M+AGL   S
Sbjct: 1   MSVLELKNLIKKFGNGKKDLVAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPS 60

Query: 64  GGSLTLAGKPIKGPQKDVGIVFQSAVLLPWRSVEDNILLQAEMRHLPMDAARARARELME 123
            G + L  K + GP  D G+VFQ   LLPW++V  N+    E++ +P +     A++ ++
Sbjct: 61  SGGIYLDEKEVLGPDADRGMVFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAKKFIK 120

Query: 124 MAGLKGFGGKYPWQLSGGMQQRASICRALLHDPSVLLMDEPFGALDAMTREKMNLELQRI 183
           M GL+ F   YP++LSGGMQQR +I R L ++P ++LMDEPFGALD  TR  +   L +I
Sbjct: 121 MVGLEEFCDSYPYELSGGMQQRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDHLLKI 180

Query: 184 WMASKKTVMLITHSIPEAIFLSDRVIVMSERPGSIAAVYDIDLPRARTLDMMASPEFGAY 243
           W   KKTV+ +THS+ EA++LSDRV+VM+ RPG I ++ DIDL R R      SPEF  Y
Sbjct: 181 WQTEKKTVVFVTHSVDEAVYLSDRVVVMTARPGKIKSIIDIDLDRPR---KRTSPEFTKY 237

Query: 244 TKLV 247
            K++
Sbjct: 238 KKMI 241