Pairwise Alignments

Query, 418 a.a., Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1) from Variovorax sp. SCN45

Subject, 312 a.a., choline uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  184 bits (468), Expect = 2e-51
 Identities = 103/236 (43%), Positives = 144/236 (61%), Gaps = 6/236 (2%)

Query: 32  KEILARTGQSIGVFDATFEIQAGEIFVIMGLSGSGKSTLVRLLNRLIEPTAGRIVIDGAD 91
           +EI  R G +  V D +  +    + V++G SGSGK+TL+R++NRL+EPTAG I IDG D
Sbjct: 5   EEISKRYGDTTVVSDVSLTVAPHTVTVVVGTSGSGKTTLLRMINRLVEPTAGTIKIDGED 64

Query: 92  INEHSDARLRALRRKDISMVFQSFALMPHMTVRENTAFGLELSGTGKKERLAQADKALA- 150
                   LR    + I    Q   L PH TV +N A    L G  K    A+ ++ L  
Sbjct: 65  NRSIPGFELR----RRIGYAIQGHGLFPHRTVAQNIATVPTLLGWEKARIDAKVEELLKL 120

Query: 151 -QVGLAGWGASYPDELSGGMQQRVGLARALASDPSILLMDEAFSALDPIIRTEMQSELLR 209
            Q+  + +G  YP ELSGG QQRVG+ARALA++P++LLMDE F ALDPIIR + Q +L  
Sbjct: 121 FQLDPSEFGPRYPHELSGGQQQRVGVARALAAEPNVLLMDEPFGALDPIIRAKAQDDLAA 180

Query: 210 LQQEQRRTIVFISHDLDEAMRIGDRIAIMKDGQVIQVGTPDEILRSPANDYVRSFV 265
           +Q+    TI+ ++HD++EA  + DRIA+M  G+V+Q  TP E+L  PA  +V + V
Sbjct: 181 IQKHFGTTIILVTHDMEEAFHLADRIAVMDKGEVVQYATPAEMLVRPATPFVETLV 236



 Score = 23.5 bits (49), Expect = 0.009
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 371 AVPVVAADGRFCGAISKTTLLK 392
           A+PV AADG   G I+   ++K
Sbjct: 285 ALPVAAADGAILGKITLEAIVK 306