Pairwise Alignments

Query, 586 a.a., Efflux ABC transporter, permease/ATP-binding protein from Variovorax sp. SCN45

Subject, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  269 bits (687), Expect = 3e-76
 Identities = 173/473 (36%), Positives = 262/473 (55%), Gaps = 15/473 (3%)

Query: 115 FFETTQTGEVLSRLTADTTLVQTVVGSSLSMGLRNAVMGVGALAVLVWTNPYVMVQVLGI 174
           FF++ Q G +++R+    T+ + + GS  ++ +    M V    + + + P   + +  +
Sbjct: 249 FFKSRQVGAIVTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATV 308

Query: 175 LVLVVLPSMWFGRRVRKLSRASQDRVADSSAIAAEVLNAIPVVQSYTAEGREASRFNGST 234
              V+L + W   R++          A +++   E +     ++S   E R   R++  T
Sbjct: 309 PCYVLL-AWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQT 367

Query: 235 ENAFRTA--VRRTKARSV-LVAFIIIATSAALLWGLYQGTQAVLRGDITAGHLGQTVVYV 291
           E    T   V++   RS  LV  +   TS A+LW    G   VL  ++T G L    +  
Sbjct: 368 EKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILW---LGATEVLSLEMTIGQLIAFNMMT 424

Query: 292 AILASATAVLGEVYGDLLRAAGATERLMELLHAPSAIFSPANPAVTPVPAAGSAIRFDAV 351
             +A   A + E++G  ++   A E+L ++L+ P    + ++           AI F  +
Sbjct: 425 NHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVTI-----SGAISFKNI 479

Query: 352 TFHY-PSRPGTPALRDFSLDVAPGETVALVGSSGAGKSTVFQLLLRYYDPQSGRLILDGA 410
            F Y P  P  P + D SLD+  GET+ +VG+SG+GKST+ +LLLR Y P+ G + +DG 
Sbjct: 480 LFRYQPDIP--PTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGI 537

Query: 411 PLASLALSDLRTRIGLVPQDAVIFSTSAFENIRYGRPEATAEEVHAAARAAFAHDFLQAL 470
           PL  + +  LR R+G+V Q+  +F  S  ENI   +PEA+ EE+  AA+ + AHDF+  L
Sbjct: 538 PLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKL 597

Query: 471 PEGYDTFLGERGVRLSGGQRQRIAIARAILKNPPLLLLDEATSALDAESERMVQAALESA 530
           P GYDT L E G  LSGGQRQR+AIAR +L +P +L+LDEATSALD ES+ ++QA + S 
Sbjct: 598 PMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASI 657

Query: 531 MEGRTTLVIAHRLATVQKADRIIVLDHGGIVEQGTHAALVAQGGVYARLAALQ 583
             GRT + IAHRL+TV+  DRIIVL  G IVEQG+H  L+A G  Y +L  LQ
Sbjct: 658 ARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710