Pairwise Alignments

Query, 677 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Variovorax sp. SCN45

Subject, 617 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  367 bits (943), Expect = e-106
 Identities = 236/661 (35%), Positives = 347/661 (52%), Gaps = 70/661 (10%)

Query: 17  PLVGAAVAGLFGTKFGGNHIGRKVTHSLTILGVLVAFIISAMTLKSVIVDGARFNATLYE 76
           PL+G  +      ++  N        S+ +  ++ A++I    +     +G  +   L+ 
Sbjct: 11  PLIGFLLLSFSRGRWSENLSALVGVGSIGLSAIVTAYVIWQFNVAPP--EGGVYVQVLWR 68

Query: 77  WMVVGGLKMEVGFMVDGLTAMMMCVVTFVSLMVHIYTIGYMEEDDGYNRFFAYISLFTFS 136
           WM V G        +DGL+  M+ VV  V  ++H++   YM  + GY+RFFAY +LF  S
Sbjct: 69  WMAVEGFTPNFALYLDGLSITMLGVVVGVGFLIHLFASWYMRGEAGYSRFFAYTNLFIAS 128

Query: 137 MLMLVMSNNMLQLFFGWEAVGLVSYLLIGFWFNKPTAIFANMKAFLVNRVGDFGFILGIG 196
           ML LV+ +N+L L+FGWE VGL SYLLIGF+++      A +KAF+V R+GD    +G+ 
Sbjct: 129 MLFLVLGDNLLFLYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVFMAIGLF 188

Query: 197 LIAAYAGTLNYTEAFAKAGTLAGITFPGTEWMLITVICICLFIGAMGKSAQFPLHVWLPD 256
           ++    GTLN  E   KA     +   G  W+++  +   L  GA+GKSAQ PL  WL D
Sbjct: 189 ILFQQLGTLNIQELLVKAPEHFKV---GDFWIVLATLM--LLGGAVGKSAQLPLQTWLAD 243

Query: 257 SMEGPTPISALIHAATMVTAGIFMVARMSPLFELSDTALSFILVIGAITALFMGFLGIIQ 316
           +M GPTP+SALIHAATMVTAG++++AR   LF L+   L  + ++G +T +  GF  ++Q
Sbjct: 244 AMAGPTPVSALIHAATMVTAGVYLIARTHGLFALAPDILHLVGIVGGVTLVLAGFAALVQ 303

Query: 317 NDIKRVVAYSTLSQLGYMTVALGASAYSVAVFHLMTHAFFKALLFLGAGSVIIGMHHNQD 376
            DIKR++AYST+SQ+GYM +ALG  A+  A+FHLMTHAFFKALLFL +G+VI+  HH Q+
Sbjct: 304 TDIKRILAYSTMSQIGYMFLALGVGAWEGAIFHLMTHAFFKALLFLASGAVIVACHHEQN 363

Query: 377 IRWMGGVRKYMPITWITSLLGSLALIGTPFF-AGFYSKDSIIEAVHESHLWGANFAYYAV 435
           I  MGG+ K +P+ + + ++G  AL   P   AGFYSKD I+    E+   G     YA 
Sbjct: 364 IFKMGGLWKKLPLAYTSFIVGGAALAALPLVTAGFYSKDEIL---WEAFASGNQALLYAG 420

Query: 436 LAGVFITAFYSFRMYFLVFHGKERYDQNPDAHHDDHGHGHDDHGHGHDHKPHESPWVVWL 495
           L G F+T+ Y+FR+ F+ FHG+ + +             H  HG  H           WL
Sbjct: 421 LVGAFMTSLYTFRLIFIAFHGEAKTE------------AHAGHGIAH-----------WL 457

Query: 496 PLVLLAIPSVVIGFMTIEPMLFGEFFKNAIFVDGAKHHAMKELEEGFHGPVAMAIHGLTT 555
           PL +L + S  +G M   P+        A  +  +  HA  E           A H L  
Sbjct: 458 PLSVLIVLSTFVGAMITPPL--------ADVLPQSVGHAGGE-----------AKHSLEI 498

Query: 556 APFWLALAGVVLSWYMYMINPALPAAIKRAFGPIYRLLENKYY----MDWFNENVIARAT 611
           A   +ALAG++L+  +++       AI  A   I R L   ++     DW  + +  +  
Sbjct: 499 ASGAIALAGILLAALLFLGKRRFVTAI--ANSGIGRFLSAWWFAAWGFDWIYDKLFVKPY 556

Query: 612 RALGTGLWKGG-DQ--ALIDGAVVNGSWKLVGRISGVVRWMQSGYIYHYAFAMLLGIFIL 668
            A+   L K   DQ   LI      G   L    +G +RW        YA +M  G  ++
Sbjct: 557 LAISHILRKDPLDQTIGLIPRMAKGGHTALSRTETGQLRW--------YAASMAAGAVLV 608

Query: 669 M 669
           +
Sbjct: 609 I 609