Pairwise Alignments

Query, 677 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Variovorax sp. SCN45

Subject, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

 Score =  122 bits (306), Expect = 4e-32
 Identities = 114/423 (26%), Positives = 201/423 (47%), Gaps = 25/423 (5%)

Query: 38  RKVTHSLTILGVLVAFIISAMTLKSVIVDGARFNATLYEWMVVGGLKMEVGFMVDGLTAM 97
           R +T+ L+++  ++     A+   ++   G   +    +W    G+     F+ D L+  
Sbjct: 27  RWLTNGLSVICSVINLFTGALLTITIYTHGPA-SIAFGQWPAPFGIV----FVADLLSVG 81

Query: 98  MMCVVTFVSLMVHIYTIGYMEEDDGYNRFFAYISLFTFSMLMLVMSNNMLQLFFGWEAVG 157
           M+ V   + L+  IY I  +     Y R+ A + +    +    ++ ++  L+  +E + 
Sbjct: 82  MVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVYGAFLTGDIFNLYVWFEVML 141

Query: 158 LVSYLLIGFWFNKPTAIFANMKAFLVNRVGDFGFILGIGLIAAYAGTLNYTEAFAKAGTL 217
           + S+ L+    N+   I   +K  L+N +    F+L IGL+    GTLN  +   KA +L
Sbjct: 142 IASFGLMVLDANQQQ-IDGAIKYVLLNLISTLVFLLSIGLLYGATGTLNLADLHDKAQSL 200

Query: 218 AGITFPGTEWMLITVICICLFIGAMGKSAQFPLHVWLPDSMEG-PTPISALIHAATMVTA 276
           A    P  + ML  ++     I    K+A FPL  WLP S    P+ I AL  AA +   
Sbjct: 201 A----PEMKTMLAGLLLFAFSI----KAALFPLFAWLPASYHTLPSAIVALF-AALLTKV 251

Query: 277 GIFMVARMSPL-FELSDTALSFILVIGAITALFMGFLGII-QNDIKRVVAYSTLSQLGYM 334
           G++ + R+  L F L  +    +L+  A   +  G LG   Q DIK+++++  +SQ+GYM
Sbjct: 252 GVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAASQYDIKKILSFHIISQIGYM 311

Query: 335 TVALGAS---AYSVAVFHLMTHAFFKALLFLGAGSVIIGMHHNQDIRWMGGVRKYMPITW 391
            + L      A + A+F+++ H   K  LFL  G +I   +    +  +GGV + MP   
Sbjct: 312 IMGLAIYTPLAITGAIFYVIHHILVKGNLFL-IGGLIGRKYGTTQLTQLGGVYRAMPWLT 370

Query: 392 ITSLLGSLALIGTPFFAGFYSKDSIIEAVHESHLWGANFAYYAVLAGVFITAFYSFRMYF 451
              LL + +L G P  +GF+ K  +I+A   + L+    A  A+L G+ +T F   +++ 
Sbjct: 371 FGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYW--LAAIALLVGL-LTIFSMTKIWN 427

Query: 452 LVF 454
            VF
Sbjct: 428 EVF 430