Pairwise Alignments

Query, 677 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Variovorax sp. SCN45

Subject, 617 a.a., NADH dehydrogenase subunit L from Pseudomonas syringae pv. syringae B728a

 Score =  365 bits (937), Expect = e-105
 Identities = 212/567 (37%), Positives = 316/567 (55%), Gaps = 53/567 (9%)

Query: 17  PLVGAAVAGLFGTKFGGNHIGRKVTHSLTILGVLVAFIISAMTLKSVIVDGARFNATLYE 76
           PL+G  +      +   N        S+ +  ++ A++I    +     +G  ++  L+ 
Sbjct: 11  PLIGFLLLSFSRGRISENLAALIGVGSIGLSAIVTAWVIWQFNVAPP--EGGHYSQVLWR 68

Query: 77  WMVVGGLKMEVGFMVDGLTAMMMCVVTFVSLMVHIYTIGYMEEDDGYNRFFAYISLFTFS 136
           WM V G +      +DGL+  M+ VV  V  ++H++   YM  + GY+RFF+Y +LF  S
Sbjct: 69  WMDVDGFQPNFALYLDGLSVTMLGVVVGVGFLIHLFASWYMRGEAGYSRFFSYTNLFIAS 128

Query: 137 MLMLVMSNNMLQLFFGWEAVGLVSYLLIGFWFNKPTAIFANMKAFLVNRVGDFGFILGIG 196
           ML L++ +N+L ++FGWE VGL SYLLIGF+++      A +KAF+V R+GD    +G+ 
Sbjct: 129 MLFLILGDNLLFIYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVFMAIGLF 188

Query: 197 LIAAYAGTLNYTEAFAKAGTLAGITFPGTEWMLITVICICLFIGAMGKSAQFPLHVWLPD 256
           ++    GTLN  E   +A     +   G  W+++  +   L  GA+GKSAQ PL  WL D
Sbjct: 189 ILFQQLGTLNVQELLVRAPEHFKV---GDFWIVLATLM--LLGGAVGKSAQLPLQTWLAD 243

Query: 257 SMEGPTPISALIHAATMVTAGIFMVARMSPLFELSDTALSFILVIGAITALFMGFLGIIQ 316
           +M GPTP+SALIHAATMVTAG++++AR   LF L+   L  + ++G +T +  GF  ++Q
Sbjct: 244 AMAGPTPVSALIHAATMVTAGVYLIARTHGLFALAPDILHLVGIVGGVTLVLAGFAALVQ 303

Query: 317 NDIKRVVAYSTLSQLGYMTVALGASAYSVAVFHLMTHAFFKALLFLGAGSVIIGMHHNQD 376
            DIKR++AYST+SQ+GYM +ALG  A+  A+FHLMTHAFFKALLFL +G+VI+  HH Q+
Sbjct: 304 TDIKRILAYSTMSQIGYMFLALGVGAWEGAIFHLMTHAFFKALLFLASGAVIVACHHEQN 363

Query: 377 IRWMGGVRKYMPITWITSLLGSLALIGTPFF-AGFYSKDSIIEAVHESHLWGANFAYYAV 435
           I  MGG+ K +P+ + + ++G  AL   P   AGFYSKD I+    E+   G N   YA 
Sbjct: 364 IFKMGGLWKKLPLAYASFIVGGAALSALPLLTAGFYSKDEIL---WEAFASGNNGLLYAG 420

Query: 436 LAGVFITAFYSFRMYFLVFHGKERYDQNPDAHHDDHGHGHDDHGHGHDHKPHESPWVVWL 495
           L G F+T+ Y+FR+ F+ FHG+ + +             H  HG  H           WL
Sbjct: 421 LVGAFMTSLYTFRLIFIAFHGEAKTE------------AHAGHGIAH-----------WL 457

Query: 496 PLVLLAIPSVVIGFMTIEPMLFGEFFKNAIFVDGAKHHAMKELEEGFHGPVAMAIHGLTT 555
           PL +L + S  IG +   P+        A  +  +  HA  E           A H L  
Sbjct: 458 PLSVLIVLSTFIGALITPPL--------AGVLPQSVGHAGGE-----------AKHSLEI 498

Query: 556 APFWLALAGVVLSWYMYMINPALPAAI 582
           A   +ALAG++L+  +++    L  AI
Sbjct: 499 ASGAIALAGILLAALLFLGKRRLATAI 525