Pairwise Alignments

Query, 218 a.a., NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) from Variovorax sp. SCN45

Subject, 169 a.a., NADH dehydrogenase subunit J from Pseudomonas syringae pv. syringae B728a

 Score = 83.6 bits (205), Expect = 2e-21
 Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 11/169 (6%)

Query: 8   FYLFAAVLLFAAFRVITSRNPVYAALYLVLAFFQASAIWLLLRAEFLAISLVLVYVGAVM 67
           FY  + + + +  RVIT+ NPV+A LYL+++    +  +  L A F  +  V+ Y GA+M
Sbjct: 5   FYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAGAIM 64

Query: 68  VLFLFVVMMLDINVDSL-REGFWKHFPLAAG---VGALIALEMAAVLMGGFRLGEARVTS 123
           VLF+FVVMML++   S+ +E  W    +  G   +GAL+  E+  VL        A  T 
Sbjct: 65  VLFVFVVMMLNLGPASVQQERAWLKPGIWIGPVILGALLLAELLYVLF-------ANPTG 117

Query: 124 GAMAADSSNTLELGKLLYSQYLYPLEIAAVILLVAIVAAIALTLRTRKD 172
             +   + +   +G  L+  YL  +E+A+++LL A + A  L     K+
Sbjct: 118 AGVGHTTVDAKAVGISLFGPYLLVVELASMLLLAAAITAFHLGRNEAKE 166