Pairwise Alignments

Query, 218 a.a., NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) from Variovorax sp. SCN45

Subject, 166 a.a., NuoJ2 NADH:quinone oxidoreductase subunit 6 (chain J) from Sinorhizobium meliloti 1021

 Score =  107 bits (267), Expect = 1e-28
 Identities = 66/162 (40%), Positives = 91/162 (56%), Gaps = 7/162 (4%)

Query: 6   GLFYLFAAVLLFAAFRVITSRNPVYAALYLVLAFFQASAIWLLLRAEFLAISLVLVYVGA 65
           G F LFA V +  A  ++ +RNPV++AL L+  F Q SAI+++L A  LA+  + VYVGA
Sbjct: 4   GFFLLFATVSVVTALTLVLARNPVHSALALMACFLQISAIFVMLGAPLLAVIQIFVYVGA 63

Query: 66  VMVLFLFVVMMLDINVDSLREGFWKHFPLAAGVGALIALEMAAVLMGGFRLGEARVTSGA 125
           +MVLFLFV+MM+D+     RE   + F     + AL  L +    M    L   R     
Sbjct: 64  IMVLFLFVIMMVDV-----REAVLQRFMPGGNLPALALLVLLGAEMVVLVLWSDRFIESP 118

Query: 126 MAADSSNTL--ELGKLLYSQYLYPLEIAAVILLVAIVAAIAL 165
             A+       +L K L+S YL P E+A+VILL A+V AI L
Sbjct: 119 PVAERGGDAIRDLSKTLFSDYLLPFEVASVILLAALVGAIVL 160