Pairwise Alignments

Query, 359 a.a., NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) from Variovorax sp. SCN45

Subject, 335 a.a., NADH dehydrogenase subunit H from Pseudomonas syringae pv. syringae B728a

 Score =  269 bits (687), Expect = 9e-77
 Identities = 138/329 (41%), Positives = 203/329 (61%), Gaps = 11/329 (3%)

Query: 18  WWTGVVWPVVWTLIKIIVVVIPLMLAVAYLTLWERKAIGFTQIRIGPNRIGPLGLLQPIA 77
           W+T  V   +  ++K IVV++ +++  A L+  ER+ +G+ Q R GPNR+GP G+ Q  A
Sbjct: 3   WFTPDVIDAIIAVVKAIVVLLAVVVCGALLSFIERRLLGWWQDRYGPNRVGPFGMFQIAA 62

Query: 78  DALKLMTKEIILPTVANKGLFLLGPIMTIMPALAAWAVIPFGPDVALANINAGLLFVMAI 137
           D LK+  KE   P  A+K +F L P++ +   L A+AVIP  P   +A++N GLLF  A+
Sbjct: 63  DMLKMFFKEDWTPPFADKVIFTLAPVVAMSALLIAFAVIPITPTWGVADLNIGLLFFFAM 122

Query: 138 TSLEVYGVIIAGWASNSKYAFLGALRASAQMVSYEIAMGFCFVVVLMVTGSLNMSEIVNV 197
             L VY V+ AGW+SN+K+A LG+LRASAQ VSYE+ MG   + +++  GS NM +IV  
Sbjct: 123 AGLSVYAVLFAGWSSNNKFALLGSLRASAQTVSYEVFMGLALMGIVVQVGSFNMRDIVEY 182

Query: 198 QGKGMFANMGVGFLSWNWLPLLPIFVVYFISGLAETNRHPFDVVEGESEIVAGHMIEYSG 257
           Q + +          W  +P    F  +FI+G+A T+RHPFD  E E E+  G+ IEY+G
Sbjct: 183 QAQNL----------WFIIPQFFGFCTFFIAGVAVTHRHPFDQPEAEQELADGYHIEYAG 232

Query: 258 MSFAMFFLAEYANMWLVSILTVVLFLGGWLPPFEFLSFIPGWIWLGAKTFCVVTMFLWVR 317
           M + MFF+ EY  + L+S L V LF GGW  PF+ L  +  + W   KT   + +F+ +R
Sbjct: 233 MKWGMFFVGEYIGIILISALLVTLFFGGWHGPFDILPSL-AFFWFALKTAFFIMLFILLR 291

Query: 318 STFPRFRYDQIMRLGWKIFIPVTLVWLVV 346
           ++ PR RYDQ+M   WK  +P+TL+ L+V
Sbjct: 292 ASIPRPRYDQVMDFSWKFCLPLTLINLLV 320