Pairwise Alignments

Query, 446 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Variovorax sp. SCN45

Subject, 801 a.a., electron transport complex subunit RsxC from Vibrio cholerae E7946 ATCC 55056

 Score = 44.3 bits (103), Expect = 1e-08
 Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)

Query: 59  LTPDQVIAEVKASGLRGRGGAGFPTGLKWSFMPRQFPGQKYLVCNSDEGEPGTCKDRDIL 118
           LTP+ ++  ++ +G+ G GGAGFPT  K   +       + L+ N+ E EP    D  ++
Sbjct: 158 LTPETLLELIRQAGISGMGGAGFPTAKK---LQSGLSRTEILIINAAECEPYITADDVLM 214

Query: 119 QFNPHIVIEGMAIAAYAMGISVGYNYIHGEIFQSYDRFEEALEEARAAGYLGDKIMGSTY 178
           +   H +I+G+ I  + +   +        I    D   EA+   + A    DK M    
Sbjct: 215 RQYAHEIIQGIEIVEHILKPKL-------TIIGIEDNKPEAVAALQQAAQ--DKPMVIRV 265

Query: 179 NFQLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAV 238
               + + G    I      +L +LE  KG        PA  GL      + N  +  A+
Sbjct: 266 IPTKYPSGGEKQLI-----KILTNLEVPKG------GIPADIGL-----MVQNVGSLQAI 309

Query: 239 PWIIRNGGPAYLECGKPNNGGTKIYSVSGD-VELPGNYEVPMGTPFSKLLELAGGVRKGR 297
              I +G P             ++ +++GD    P N    +GTP   LL    G +  +
Sbjct: 310 ARAIVHGEPLI----------RRVVTLTGDCFRKPRNVWALLGTPVQALLN-EFGYKADK 358

Query: 298 TLKAVIPGG 306
            L  +I GG
Sbjct: 359 KLPRLIMGG 367