Pairwise Alignments

Query, 311 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 61/304 (20%), Positives = 131/304 (43%), Gaps = 20/304 (6%)

Query: 1   MSERSKGMALCALAMVTVGSTVVASKVIAGGLPPFTATALRFAMALPVFLLLLRLTRTPW 60
           M++RS G+ L  L ++  G + V++K+I   +PP T   +R  +A  + +  +R     +
Sbjct: 1   MNDRSLGILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFFIR----NF 56

Query: 61  PRPDRRDMALLLSQAGLGSVGYTVLLIMGVRWAPAASAGVVAGTLPAVAALVAVIALRER 120
            +  + D   ++    LG   Y +   + +++  A +A ++A T+P    +V+ I  ++ 
Sbjct: 57  TKYSKEDFVYIVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEKKI 116

Query: 121 PGRYLVGSIVLATAGVLAISWPGAGAASAGDSKSPAALLGNLLVLGAVVCEAMFILLNKR 180
           P +      ++   GV  +   G               LG++L+ GAV    ++  + ++
Sbjct: 117 PSKIKYFGSLIGLFGVFILILNGKFVLELNP-------LGDILMFGAVCTWVLYTFVIQK 169

Query: 181 LRVPVRPLALSTLMAAFGLLLSLVPALLERAWERPLPMAALA------GVAYYALVPTVL 234
           L+     L ++  +   G +  +   ++E  +        L        + Y A+  + +
Sbjct: 170 LQ-KHDDLKVTRDITLIGAVFFIPFTIMELGYNGMFEFTILLNPYIAFSLLYLAIFCSAI 228

Query: 235 GFVLWFAGSSRLRGAEAAL-FTAILPVSALALAALWLGESISLAQIAGAACVLGAVGLAS 293
            ++ W   + RL GA        I+P+ A+   A+ L    ++  I GA  VL  V ++ 
Sbjct: 229 AYLFWNM-AIRLAGASTTTNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLVLFGVYISE 287

Query: 294 LDGR 297
             G+
Sbjct: 288 NGGK 291