Pairwise Alignments

Query, 414 a.a., Nitrate ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 407 a.a., sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative from Synechococcus elongatus PCC 7942

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 35/283 (12%)

Query: 9   LSRRRVLQAAAIG------AVGIDPALRAAVWAQGSDKPEKEEVKIGFIPLTDCASVVMA 62
           LSRR+ L+ + +       A G  P+   A     S     + +KIG++P+TD A +++ 
Sbjct: 12  LSRRQFLKLSGLFTGSLALAAGCRPSDNTAT--APSSPANNQPLKIGYLPITDAAPLLIG 69

Query: 63  SVLGIDKKYGVKI-VPSKEASWAGVRDKLSNGDLDMAHVLYGLVYGMHLGLSGPRKDMAV 121
                 ++ G+++  P+   SW  + +      ++  H+L      +  G + P K   V
Sbjct: 70  HSQKFFEQEGLQVEAPTLFRSWPQIIEAFIARKVNAIHLLMPATISLRYGRNFPAK---V 126

Query: 122 LMTLNNNGQAITLSKKLSDKGAVDAASLAKLIASEKREYTFAQTFPTGTHAMWLYYWLAS 181
           +   + NG A+T+   ++                +    T A  F    H + L   L  
Sbjct: 127 VAWNHTNGSALTVGPSVNK-------------VEDLAGRTIAVPFWYSVHNVVLQQVLQD 173

Query: 182 AGIDPFK----------DVKNITVPPPQMVANMRVGNMDGYCVGEPWGQRAIMDGIGITA 231
            G+   +          +V  + +PPP M++ +   ++ GY V +P+   A    +G   
Sbjct: 174 TGLKVVRRPREAAIADDEVNLVVLPPPDMISALANDSIGGYIVADPFNAAAEKRKVGKIL 233

Query: 232 ITTQDIWKDHPEKVLGCTAEFTKKYPNTARAVTAAILEAGKWI 274
             T D+WKDH   V+    +  K+ P  A+ V   ++ +  W+
Sbjct: 234 RFTGDVWKDHACCVIFMHEDDLKERPEWAQRVVNGLVASQAWM 276