Pairwise Alignments

Query, 306 a.a., Nitrate ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 281 a.a., aliphatic sulfonate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  107 bits (268), Expect = 2e-28
 Identities = 64/235 (27%), Positives = 123/235 (52%), Gaps = 3/235 (1%)

Query: 59  LAGFGLLLLIWEIVAMKSTTGFPTPAATWQQALTVFSDPFYSKGPNDQGVGWNVLSSLQR 118
           L+ +GLL+    +    ST G+  PA  +     + S  +   G +   +  ++  SLQR
Sbjct: 36  LSRYGLLIAFLALWQAASTAGWINPAV-FPSVGAILSALW--TGISGGALLDDIAISLQR 92

Query: 119 VALGFGLAALVGIPAGFAIGRFEFLSRMFNPLISLMRPVSPLAWLPIGLLVFKGANPAAI 178
               F  A ++ IP G  +G+   +    +P++ L R  S LA  P+ +L+      + +
Sbjct: 93  SGTAFVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLGEASKV 152

Query: 179 WTIFICSIWPMVINTAVGVQRVPTDYMNVAKVLNLSEWKILTKILFPSVLPYMLTGVRLA 238
           + IF  +++P++++T  GV+ V +  + +A+V   S   +  +++ P  +P +  G+RL+
Sbjct: 153 FVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIFVGLRLS 212

Query: 239 VGTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVANIIIAIFVIGIVGLVLEFALI 293
             TA L+++A+EM+    GIGF V +   N  +  +  AIF++  +GLV  +AL+
Sbjct: 213 ATTALLLLIASEMIGANKGIGFQVMNAQYNFQIPLMFAAIFILAGLGLVSNYALV 267