Pairwise Alignments

Query, 306 a.a., Nitrate ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  128 bits (321), Expect = 2e-34
 Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)

Query: 53  MRVLPPLAGFGLLLLIWEIVAMKSTTGFPTPAATWQQALTVFSDPFYSKGPNDQGVG--- 109
           M++L  L    + +L WE +A+        P    +  +++  +P    G    G G   
Sbjct: 1   MKILKNLTLPIIGILAWEALAIYLNNPVILPKV--ESVISILLNP----GVGILGTGNLI 54

Query: 110 WNVLSSLQRVALGFGLAALVGIPAGFAIGRFEFLSRMFNPLISLMRPVSPLAWLPIGLLV 169
            N + S++RV +GF +A    IP G  +G +  ++ +F+  + L+RP+ PLAW+P+ L  
Sbjct: 55  ENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAW 114

Query: 170 FKGANPAAIWTIFICSIWPMVINTAVGVQRVPTDYMNVAKVLNLSEWKILTKILFPSVLP 229
           F     +  + IFI + +P++INT  GV+ VP   +  AK L  S   IL  ++ P+  P
Sbjct: 115 FGIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSP 174

Query: 230 YMLTGVRLAVGTAWLVIVAAEMLTGG-VGIGFWVWDEWNNLNVANIIIA-IFVIGIVGLV 287
            +LTG+R+  G AW+ +VAAEML G   G+G+ +   + +L+  NI++A + +IGI+G++
Sbjct: 175 DILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAY-SLSKMNIVVASMIIIGIIGII 233

Query: 288 LEFAL 292
           L+  L
Sbjct: 234 LDKGL 238