Pairwise Alignments

Query, 930 a.a., Assimilatory nitrate reductase large subunit (EC 1.7.99.4) from Variovorax sp. SCN45

Subject, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  322 bits (824), Expect = 8e-92
 Identities = 231/802 (28%), Positives = 360/802 (44%), Gaps = 113/802 (14%)

Query: 5   RSTCPYCGVGCGVIIESHGDEITGVRGDPEHPANFGRLCTKGSTLHLTASATVTRQTRLL 64
           ++ C +CG GC V++ +    +   +GDPE P N G  C KG  L    S  +  Q RL 
Sbjct: 45  KAPCRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFL----SKIMYGQDRLK 100

Query: 65  QPMQRIVRREAP-----TVVTWDTALDNAAGKFAQVIRDHGPDSVGFYVSGQLLTEDYYV 119
            P+ R+   +       T V+WDTA D  A K+   ++  GP SVG + SGQ    + Y 
Sbjct: 101 TPLLRMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYA 160

Query: 120 FNKLAKGLIGTNNIDTNSRLCMSSAVAGYKQTLGADAPPACYDDLKHAQCILIVGSNTAW 179
             KL K    +NNID N+R CM+SAV G+ +T G D P  CYDD +HA   ++ GSN A 
Sbjct: 161 AVKLMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAE 220

Query: 180 AHPILFRRLEDAKAANPALKIVVADPRRTDTAEIADLFLPIQPGTDVMLFNGMLHLMLWE 239
            HP+L+ R+ D + ++P +K+ V       + E+AD      P +D+ + N + + ++  
Sbjct: 221 MHPVLWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQN 280

Query: 240 GWMDAKYIAAHTN---------------------------------GFDALKATVRECTP 266
             ++  ++  HT+                                  F+  K +V   T 
Sbjct: 281 DAVNWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTV 340

Query: 267 DKVAQVCGVSKEDLLEAARLFA-TSPATLSLYCQGLNQSSSGTAKNAALINLHLATAQIG 325
           +K +++ GVS + L+  A+ +A  +   +SL+  G+NQ + G    + + NLHL T +I 
Sbjct: 341 EKASEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIA 400

Query: 326 KPGAGPFSLTGQPNAMG-GREVGGLANLLSAHRDLANPDHRAEVAALWGVP--SVPEKPG 382
            PG  PFSLTGQP+A G  REVG  A+ L A   +ANP HRA    +W +P  ++PEKPG
Sbjct: 401 TPGNSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPG 460

Query: 383 KTAVEMFQAAADGEIRALWIACTNPAQSMPDQATVRRALER--AEFVVVQEAFATTATCA 440
             AV+  +   DG +   W+ C N  Q+ P+    R    R    F+VV +A+  T T  
Sbjct: 461 FHAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAY-PTVTAQ 519

Query: 441 FADLLLPATTWGEKEGTVTNSERRISRVRPAVPAPGAARNDWSIAVAFAHRLE------- 493
            ADL+LP   W EKEG   N+ERR       V   G + +D    + F+ R +       
Sbjct: 520 AADLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPE 579

Query: 494 --------------------------------RQMGRAFTLFPYETAESVWNEHRESTRG 521
                                           R++      F +   + ++ E+ E  RG
Sbjct: 580 ELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRG 639

Query: 522 RDLDITGMSYAMLETAGPQQWPLKEGESTGRARLYEDG-----------VFPTPDGRARF 570
              D+    Y +       +WP+ +G+ T + R  E              +  PDG+A  
Sbjct: 640 HGHDLA--PYDVYHQVRGLRWPVVDGKET-KWRFKEGSDPYAKAGSGWDFYGKPDGKAWI 696

Query: 571 VDTIYKPVAEAREARYPFSLNTGRLRDQWHGMSRTGTAGRLFGHVPEPVVQMNAQDMARR 630
           + + Y+   E     Y   L TGR+ + WH  + T     L+  VP+ +  M+ +D   R
Sbjct: 697 ISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQAR 756

Query: 631 QIREGDLVHLTSRRGSIMLPARASAEVGLSQAFVAMHWGEEYLSGCSSNGTRLAGINALT 690
            +R GD V +++ RG + +           +  V + + +  +            +N L 
Sbjct: 757 GLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARIL-----------VNKLI 805

Query: 691 TPAFCPTSKQPELKHTPVKILK 712
             A  P SKQ + K  PVKI K
Sbjct: 806 LDATDPLSKQTDFKKCPVKITK 827