Pairwise Alignments

Query, 305 a.a., ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  124 bits (311), Expect = 3e-33
 Identities = 83/278 (29%), Positives = 152/278 (54%), Gaps = 17/278 (6%)

Query: 32  LLFFLIPLALVAMVSLWNFNEYELIPAVTLRNYLSLFEGCSRLTDNGDLCVTLNTYLSTF 91
           +LF LIP  ++   S    +E  LI       +   FE  +RL D     +     L +F
Sbjct: 21  VLFVLIPNLMIIGTSFLTRDEANLI------KFAFTFENYTRLLDP----LYGKVMLHSF 70

Query: 92  KFCVLVWGITLLIGFSVAYFLAFHVRSSTMQTVLFVLCTVPFWTSNVIRMISWVPLLGRN 151
              ++   I L+IG+  AY +A        +  +  L  VPFWT+++IR      +LG  
Sbjct: 71  YMAIVATLICLVIGYPFAYIVA--KMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQ 128

Query: 152 GLVNQALMGVGLANQPVEWLLFSDFSVVLAFVHLYTMFMIVPIFNSMMRIDRSLLEAASD 211
           G++NQALM +GL + P+  ++F++ +V++  V++   FMI+P+++++ ++D + +EAA D
Sbjct: 129 GILNQALMSLGLIDAPLR-IMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAARD 187

Query: 212 AGASGWQTLWNVVVPLSRTGILIGSIFVITIVMGDFVTIGVMGGQQIASIGKIIQVQT-S 270
            GA+ +QTL  V++PL+  GI+ G + V+   +G F    ++GG +   IG +I+ Q  +
Sbjct: 188 LGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVLN 247

Query: 271 YLQFPLAAANAMIL---LAVVLMIIWGLTRLVDIRKEL 305
              +P  AA ++ L   +A++L   +   +L++ + EL
Sbjct: 248 ARDWPFGAATSIALTLAMAIMLYAYYRAGKLLNKKVEL 285