Pairwise Alignments

Query, 305 a.a., ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

Subject, 291 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  122 bits (306), Expect = 1e-32
 Identities = 77/263 (29%), Positives = 144/263 (54%), Gaps = 21/263 (7%)

Query: 30  VFLLFFLIPLALVAMVSLWNFNEYELIPAVTLRNYLSLFEGCSRLTDNGDLCVTLNTYLS 89
           + +LFF++P+A++   S+         P   L NY  L    + L            + +
Sbjct: 33  LLILFFVLPVAMLLTRSVTE-------PVPGLGNYAELLGSSTYL----------RIFAN 75

Query: 90  TFKFCVLVWGITLLIGFSVAYFLAFHVRSSTMQTVLFVLCTVPFWTSNVIRMISWVPLLG 149
           TF    LV  ++LLIGF VA+ LA  +  S   +++F +  +  WT+ + R  +W+ LL 
Sbjct: 76  TFIVSSLVTLVSLLIGFPVAWALA--IMPSRAASIVFAILLLSMWTNLLARTYAWMVLLQ 133

Query: 150 RNGLVNQALMGVGLANQPVEWLLFSDFSVVLAFVHLYTMFMIVPIFNSMMRIDRSLLEAA 209
           R G++N+ L+G+GL + P+  L+ +   V +   ++   F+I+P++  + +ID ++L+AA
Sbjct: 134 RTGVINKMLLGMGLIDTPLP-LVNNLTGVTIGMTYIMLPFIILPLYGVIRKIDPAILQAA 192

Query: 210 SDAGASGWQTLWNVVVPLSRTGILIGSIFVITIVMGDFVTIGVMGGQQIASIGKII-QVQ 268
           +  GA+ WQ+L  V++PL+  G+  G++ V  + +G FVT  ++GG     + ++I Q  
Sbjct: 193 ALCGANRWQSLVRVLLPLAMPGMAAGALMVFVMSLGYFVTPALLGGTSNMMLAELIAQFV 252

Query: 269 TSYLQFPLAAANAMILLAVVLMI 291
            S + + +  A A++LL V L +
Sbjct: 253 QSLVNWGMGGAAALVLLVVTLAL 275



 Score = 29.6 bits (65), Expect = 9e-05
 Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 23/141 (16%)

Query: 153 LVNQALMGVGLANQPVEWLLFSDFSVVLAFVHLYTMFMIVPIFNSMMRIDRSLLEAASDA 212
           +V+Q   G G    P +    +DF + L  + L  +F ++P+    M + RS+ E     
Sbjct: 1   MVSQTETGSGRPYSPAQVRRLTDFDLTLPALGLLILFFVLPV---AMLLTRSVTEPVPGL 57

Query: 213 GASGWQTLWNVVVPLSRTGILIGSIFVITIVMGDFVTIGVMGGQQIASIGKIIQVQTSYL 272
           G        N    L  +  L   IF  T ++   VT+          +  +I    ++ 
Sbjct: 58  G--------NYAELLGSSTYL--RIFANTFIVSSLVTL----------VSLLIGFPVAWA 97

Query: 273 QFPLAAANAMILLAVVLMIIW 293
              + +  A I+ A++L+ +W
Sbjct: 98  LAIMPSRAASIVFAILLLSMW 118