Pairwise Alignments

Query, 256 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 256 a.a., histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP from Vibrio cholerae E7946 ATCC 55056

 Score =  266 bits (679), Expect = 4e-76
 Identities = 141/248 (56%), Positives = 173/248 (69%), Gaps = 3/248 (1%)

Query: 4   PLIEIRNLKKAFGQNVVLKDISLQVGRGQVVAIIGPSGSGKSTLLRCINLLSVPNAGRVT 63
           P +EI+NL K FGQN VLK ISLQ  +G V++IIG SGSGKST LRCINLL  P AG + 
Sbjct: 5   PALEIKNLHKTFGQNEVLKGISLQAQKGDVISIIGSSGSGKSTFLRCINLLETPTAGEIW 64

Query: 64  VGEQTIEFNGVH--TTLP-NERALARFRASTGMVFQHFNLFPHMTVLRNVMEGPVTVLKT 120
           V  + I+       T  P  E+ + R R+   MVFQ FNL+ HMTVL NV+E PV VL  
Sbjct: 65  VKGELIQMKTTRQGTVQPAKEKQVQRIRSRLAMVFQSFNLWSHMTVLENVIEAPVHVLGV 124

Query: 121 PKPQAEAEARALLAKVGLLERADYFPDKLSGGQKQRVAIARALAMKPAVMLFDEATSALD 180
           PK QA  +A  LL KVGL ER DY+P  LSGGQ+QR AIARALA++P VMLFDE TSALD
Sbjct: 125 PKAQAIEQAERLLRKVGLYERKDYYPGHLSGGQQQRAAIARALAVEPEVMLFDEPTSALD 184

Query: 181 PELVGEVLGVIKGLARDGMTMILVTHEIGFAREVADQVIFMRDGVVAESGPPEAVIDNPT 240
           PELVGEVLGV++ LA +G TM++VTHE+ FAR+V++ V+F+  G V E G PE +  NP 
Sbjct: 185 PELVGEVLGVMRDLAEEGRTMLVVTHEMAFARDVSNHVMFLHQGKVEEQGKPEKLFKNPD 244

Query: 241 QAATQAFL 248
               + F+
Sbjct: 245 SERLKQFI 252