Pairwise Alignments

Query, 265 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 228 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  140 bits (354), Expect = 2e-38
 Identities = 75/204 (36%), Positives = 119/204 (58%), Gaps = 1/204 (0%)

Query: 40  ASGTAYDWDFGVLWSYRRLLLIGLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPI 99
           A+   Y  +F  +W    LLL GLA +L    V ++ G  IGLIT  G +SR   +  P 
Sbjct: 6   AASMTYSLNFAAVWRSFDLLLEGLALSLGLAFVAILAGCVIGLITAFGLISRRALLRKPA 65

Query: 100 RAYIEVFRCTPVLVQLVWFYYALPVLTGLEISAVAAATLCLSLYGGAFYSEIVRGGIISI 159
             Y+ V R TP+LV +++ Y+ALP L G+ +  + +    L++Y GA+ +E+ RGG+I+I
Sbjct: 66  GLYVTVIRNTPILVLVLFSYFALPEL-GVRLGKIESFVATLAIYSGAYLAEVFRGGLIAI 124

Query: 160 DNGQVEAARALGMTRMQLMRRIVLPQAFKRMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQ 219
             GQ EA  A+G+T MQ+   I++P   + ++P L S  I   K+TSL + +AVP+L ++
Sbjct: 125 PPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFE 184

Query: 220 GQVIAHETYRPLELYTFIAVAYFA 243
            + I  ET+R +E +   +  Y A
Sbjct: 185 ARKINVETFRVIETWIVASCLYVA 208