Pairwise Alignments

Query, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 271 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 63.2 bits (152), Expect = 6e-15
 Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 20/277 (7%)

Query: 4   KRNFIRALVAAVAACTLGPAFAQDQESSLARVQRTHVLRVGAIAGAIPYFAKDPGTGKWE 63
           +R  I  L AA+ A  + PA AQ  E+    ++    ++VG +    P+   D    + +
Sbjct: 11  RRIAISVLGAAIVAGLVAPAAAQTVET----IKSAGTVKVGMLVDFPPFGIMD-ANNQPD 65

Query: 64  GFGPDFGESLAKSLGAKVEYVETTWGNAVLDLQSNKIDAMF-GLAPSPQRAAMVNFADTL 122
           G+  D  + LAK LG +V  V  T  N +  LQSN++D +   L  + +RA  V+F+   
Sbjct: 66  GYDADVAKLLAKELGVEVTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPY 125

Query: 123 FENTYTVVCKKGVPQKSWEQLNTPETKIVVDIGSSHDQLAQRVLPK-ADVTRLENSGAAT 181
              +  V     +     E L      I V   S+ D    ++ P+ A++ R ++  +A 
Sbjct: 126 AGISIGVFGAADLAVTKPEDL--AGKTIGVARASTQDTATTKIAPQDANIQRFDDDASAV 183

Query: 182 MSLQAGRADCQVLVILLAEPLLAKRPGL--GTMYIPQPVYTAPVSIGLRKDSDPGLQKAV 239
            +L +G+ +   +  ++A  + A  PG     + + Q V      I +RK S   L K V
Sbjct: 184 QALLSGQVELIGVSNVVAAQIEAAAPGRFNQKLQLSQQVQ----GIAVRKGSSEML-KFV 238

Query: 240 NAWLAQERSKGEVRSVILKNMEKLAGVPASAFPPEIK 276
           N +L + ++ G++ ++     EK  G P   F  E K
Sbjct: 239 NGFLDKVKADGQLNAI----HEKWLGSPLPEFVTEAK 271