Pairwise Alignments

Query, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 272 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 97.1 bits (240), Expect = 4e-25
 Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 9/243 (3%)

Query: 15  VAACTLGPAFAQDQE----SSLARVQRTHVLRVGAIAGAIPYFAKDPGTGKWEGFGPDFG 70
           +AA    PA A D E    S+L  +     LRVG  AG +P+   D   G + GF  D  
Sbjct: 12  MAALLAAPAMAADIELAKKSTLNEIMARGELRVGFDAGYLPFEMTDKN-GNYVGFDIDIA 70

Query: 71  ESLAKSLGAKVEYVETTWGNAVLDLQSNKIDAMF-GLAPSPQRAAMVNFADTLFENTYTV 129
           + +A+++G K   V T +   +  L S+K D +  G+  + +R   +NFAD       TV
Sbjct: 71  KEMARAMGVKFVPVNTDFDGMIPALLSDKFDIIISGMTVTQERNLKINFADPYIVVGQTV 130

Query: 130 VCKKGVPQK--SWEQLNTPETKIVVDIGSSHDQLAQRVLPKADVTRLENSGAATMSLQAG 187
           +  K +  K  SW+ LN+PE  +V  +G++ ++ A+R+LPKA     +      + +  G
Sbjct: 131 LLSKKLEGKVKSWKDLNSPEYTVVSRLGTTGEEAAKRMLPKAKFKSFDKEADGALEVVNG 190

Query: 188 RADCQVLVILLAEPLLAKRPGLGTMYIPQPVYTAPVSIGLRKDSDPGLQKAVNAWLAQER 247
           RAD  V  +      +A++     +++ +P    P+  G++K  DP     +N ++ Q +
Sbjct: 191 RADAWVYDMPFNVVFMAEQGKDKVVHLDKPFTYEPLGFGIKK-GDPDFLNFLNNFMRQIK 249

Query: 248 SKG 250
           + G
Sbjct: 250 NDG 252