Pairwise Alignments

Query, 333 a.a., UDP-glucose 4-epimerase (EC 5.1.3.2) from Variovorax sp. SCN45

Subject, 335 a.a., NAD dependent epimerase/dehydratase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 50.1 bits (118), Expect = 8e-11
 Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 17/188 (9%)

Query: 10  RVLVTGGDGFLGRGVLAALAAQGR----LETL-----VCADVREVPAERQLEGVVYLRQD 60
           + LVTG  GF+G  V   L A G     ++ L     V   +  +     L    +++ D
Sbjct: 2   KYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLD 61

Query: 61  VRDA-GIAGAIADHAIDTVVHLASI--VTPGKDSNRAFEHSVDVGGTRNVLEACVANGVR 117
           + D  GIA   A      V+HLA+   V    D+  A+  S ++ G   +LE C  + + 
Sbjct: 62  LADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADS-NLVGHLTILEGCRHHKIE 120

Query: 118 HIVLSSSGAAYGYHADNPAWIDESWPLRGNVVFAYADHKRQVEEMLADYRRRHPALAQTV 177
           H+V +SS + YG +   P   ++S     + +  YA  K+  E M   Y   +  L  T 
Sbjct: 121 HLVYASSSSVYGLNQKMPFSTEDS---VDHPISLYAATKKANELMSHTYSHLY-QLPTTG 176

Query: 178 LRIGTILG 185
           LR  T+ G
Sbjct: 177 LRFFTVYG 184