Pairwise Alignments

Query, 280 a.a., Various polyols ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 288 a.a., ABC transporter for L-Fucose, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  123 bits (308), Expect = 5e-33
 Identities = 76/258 (29%), Positives = 133/258 (51%), Gaps = 10/258 (3%)

Query: 20  LIVAGLSALVPVLWTFLNSFKNRVDIVSAVPKLFFTPTLENYVYVLSREAVAQGLV---- 75
           L +A L   +P LW  L+S +  V+I+ A P ++   TL    Y        QG V    
Sbjct: 22  LFLAMLVICLPGLWIVLSSLRPTVEIM-AKPPVWIPETLSLDAYRAMFSGAGQGGVPVWD 80

Query: 76  ---NSIVVVGAAVIVGALLGLPAAYALARYPLRWADDIQFFVLSMRFLPPVAVAIPLMVI 132
              NS++V   + ++   +GL   YA ARY  +    I    +  R +P +A+++PL ++
Sbjct: 81  YFRNSLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLFML 140

Query: 133 WLQLELYDTRFALIVTYTLLTLSTVIWLAIPAFKAVPKEVEEAGRVDGYGPYAIFFKVAL 192
           + +  + DT F+LI+TY  L +   IWL    F+ VPK++ EA ++DG  P+  F++V  
Sbjct: 141 YARTGIIDTHFSLILTYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTPWQAFWQVEF 200

Query: 193 PIAARSLVGAIAFGFVLVWNEFLIALMLTTS-DAKTLPIVASELSQLGRDVPWGILNASV 251
           P+A   +  A  F F+  WNE+ +A  +T S ++KTLP+   + +     + W  + A  
Sbjct: 201 PLAGPGIASAGIFAFLTSWNEYALASQITRSVNSKTLPVGLLDYT-AEFTIDWRGMCALA 259

Query: 252 ILLSLPPLLMVGVLSGFL 269
           +++ +P L +  ++   L
Sbjct: 260 VVMIVPALTLTFIIQKHL 277