Pairwise Alignments

Query, 280 a.a., Various polyols ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 276 a.a., ABC transporter for D-trehalose/D-maltose/sucrose, permease component 2 (ThuG) (from data) from Sinorhizobium meliloti 1021

 Score =  125 bits (315), Expect = 8e-34
 Identities = 82/265 (30%), Positives = 142/265 (53%), Gaps = 15/265 (5%)

Query: 3   AVAKKKISVGTLFARLVLIVAGLSALVPVLWTFLNSFKNRVDIVSAVPKLFFTPT---LE 59
           A+AK+     T F  LV ++  L A+ P  +  L S K+     +A+ ++ + PT   L 
Sbjct: 4   AIAKR-----TAFYALVAVII-LVAVFPFYYAILTSLKSG----TALFRIDYWPTDISLA 53

Query: 60  NYVYVLSREAVAQGLVNSIVVVGAAVIVGALLGLPAAYALARYPLRWADDIQFFVLSMRF 119
           NY  + S     + L NS++V    V +  LL + AAYALAR   R    +   +LS+  
Sbjct: 54  NYAGIFSHGTFVRNLGNSLLVATLVVAISLLLAVTAAYALARVRFRGRGLLLLTILSVSM 113

Query: 120 LPPVAVAIPLMVIWLQLELYDTRFALIVTYTLLTLSTVIWLAIPAFKAVPKEVEEAGRVD 179
            P +AV   L  +   + +++T  ALI +Y + TL   +W+     + +P E+EEA  VD
Sbjct: 114 FPQIAVLAGLFELIRFVGIFNTPLALIFSYMIFTLPFTVWVLTTFMRDLPIEIEEAAIVD 173

Query: 180 GYGPYAIFFKVALPIAARSLVGAIAFGFVLVWNEFLIALMLTTSDA-KTLPIVASELSQL 238
           G  P+ +  +V +P+   +LV      F+  WNEFL AL  T+S+  +T+P+  + LS  
Sbjct: 174 GASPWVVITRVFMPLMWPALVTTGLLAFIAAWNEFLFALTFTSSNTQRTVPVAIALLSGG 233

Query: 239 GR-DVPWGILNASVILLSLPPLLMV 262
            + ++PWG + A+ +++++P +++V
Sbjct: 234 SQFEIPWGNIMAASVIVTVPLVVLV 258



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 202 AIAFGFVLVWNEFLIALMLTTSDAKTLPIVASELSQLGRDVPWGILNASVILLSLPPLLM 261
           A+ F +++    F + ++  T+  + LPI   E + +    PW ++    + L  P L+ 
Sbjct: 138 ALIFSYMIFTLPFTVWVL--TTFMRDLPIEIEEAAIVDGASPWVVITRVFMPLMWPALVT 195

Query: 262 VGVLS 266
            G+L+
Sbjct: 196 TGLLA 200