Pairwise Alignments

Query, 280 a.a., Various polyols ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 276 a.a., ABC transporter for D-Sorbitol, permease component 1 (from data) from Phaeobacter inhibens DSM 17395

 Score =  142 bits (357), Expect = 1e-38
 Identities = 84/265 (31%), Positives = 136/265 (51%), Gaps = 7/265 (2%)

Query: 3   AVAKKKISVGTLFARLVLIVAGLSALVPVLWTFLNSFKNRVDIVSAVPK-LFFTPTLENY 61
           AV  ++ ++ T  A  V    GL    P+LWT L SFK     +S  P  LFF  TLENY
Sbjct: 4   AVTPRRKAINTALAWAV----GLLIFFPILWTILTSFKTEAQAISDPPVFLFFDWTLENY 59

Query: 62  VYVLSREAVAQGLVNSIVVVGAAVIVGALLGLPAAYALARYPLRWADDIQFFVLSMRFLP 121
             V  R    + L NS+++ G + I+G ++ +PAA+++A  P +   DI  ++LS + LP
Sbjct: 60  SVVQERSDYMRFLWNSVIIAGGSTILGIIIAVPAAWSMAFVPSKRTKDILLWMLSTKMLP 119

Query: 122 PVAVAIPLMVIWLQLELYDTRFALIVTYTLLTLSTVIWLAIPAFKAVPKEVEEAGRVDGY 181
            V V  P+ ++++++ L D RF L+V   L+ L  ++W+    FK +P E+ EA R+DG 
Sbjct: 120 AVGVLYPIYILFIKMGLLDNRFGLVVVLMLINLPIIVWMLYTYFKEIPGEILEAARMDGA 179

Query: 182 GPYAIFFKVALPIAARSLVGAIAFGFVLVWNEFLIALMLTTSDAKTLPIVASELSQLGRD 241
                   V  P+A   +   +    +L WNE    L LT   AK  P+ A   S    +
Sbjct: 180 TLKEEILYVLTPMAIPGIASTLLLNIILAWNEAFWTLNLTA--AKAAPLTAFIASYSSPE 237

Query: 242 VPWGILNASVILLSLPPLLMVGVLS 266
             +    ++   +++ P+L++G  S
Sbjct: 238 GLFYAKLSAASTMAIAPILILGWFS 262