Pairwise Alignments

Query, 316 a.a., Transcriptional regulator of various polyols utilization, AraC family from Variovorax sp. SCN45

Subject, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (288), Expect = 1e-30
 Identities = 82/268 (30%), Positives = 126/268 (47%), Gaps = 13/268 (4%)

Query: 42  FDC-WHYHDEYELQCIN----RSSGDAFVGDHIGRFEPGYVALVGARLPHTWISHDVPPE 96
           F C WHYH EYEL        R  G+ F GD IG  E   + L G  LPH      +  +
Sbjct: 30  FSCPWHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQLINK 89

Query: 97  GIAERSMVIHFRDEPLRKGTDLFPELKAVLPMLDRAKLGIEFFGIHAL-VRERFLQVQAK 155
                S +I F+ E L K   + P+ +A+  +   A  G+      A  V E    V  +
Sbjct: 90  AQTLHSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANVDQQ 149

Query: 156 EGMARLAEFIGLLHELARWPDWRQIS-----STAEPAGEDPSANTRMRRVLDYLDQHLTE 210
               +    I  L  +A     +++S      TA  +  D     ++ +   Y++QH  +
Sbjct: 150 PHSYQSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAK--QYVEQHYAQ 207

Query: 211 ELSLPAVCAVANMAESSFSRYFHKHMGATFTDFVTRLRIAKACEMLQTSDRLVSDICYEV 270
            + +  +C   +++ESS  R F KH G +F++ + + RI KACE+L +S   ++ I    
Sbjct: 208 AIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAERT 267

Query: 271 GFANLANFNRRFLQLKGMTPSAYRYQAQ 298
           GF NL+NFNR+F  LK MTP  +R + Q
Sbjct: 268 GFGNLSNFNRQFKTLKTMTPREFRQRFQ 295