Pairwise Alignments

Query, 1070 a.a., Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA from Variovorax sp. SCN45

Subject, 1040 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Pseudomonas stutzeri RCH2

 Score =  640 bits (1652), Expect = 0.0
 Identities = 369/1058 (34%), Positives = 603/1058 (56%), Gaps = 39/1058 (3%)

Query: 1    MFERIIRFSIEQRWLILLAVLGMAALGIFSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M   +IR+S+  R+L+LLA L M A+G+++ +  PIDA+PD+++VQV I T  PG +P  
Sbjct: 1    MIAALIRWSVLNRFLVLLATLLMTAVGVWAIRTTPIDALPDLSDVQVIIRTPYPGQAPQI 60

Query: 61   TEQRVTYPIETVMAGLPGLQQTRSLSRYGLSQVTVIFKDGTDIYFARQLVNERIQSARES 120
             E +VTYP+ T M  +PG +  R  S +G S V V+F+DGTD+Y+AR  V E +   +  
Sbjct: 61   VENQVTYPLTTTMLSVPGAKTVRGYSFFGDSFVYVLFEDGTDLYWARSRVLEYLSQVQSR 120

Query: 121  MPRGISPVIGPISTGLGEIYLWTVEAEEGARKADGKPYSSTDLREIQDWIIKPQLRNVAG 180
            +P    P +GP +TG+G I+ + +    G        +    LR +QDW +K +L  +  
Sbjct: 121  LPASAKPSLGPDATGVGWIFQYALVDRSGR-------HDLAQLRSLQDWFLKYELITLPN 173

Query: 181  VTEINSIGGYAKEFQISPDPAKLLAHGLTMTDLVTALERNNANVGAGYIEKRGEQYLIRA 240
            V E+ +IGG  K++Q+  DP K+ +  +T   ++ A+   N   G   +E    +Y++RA
Sbjct: 174  VAEVATIGGMVKQYQVVLDPLKMASLAVTQAQVIEAIGMANQETGGAVLELAETEYMVRA 233

Query: 241  PGQVKSVEDIGNVILG-NANGIPLRVQDVAEVGIGKELRTGAATDNGR-EVVLGTVFMLI 298
             G +++++D   + L  +A G+P+ + DVA V +G E+R G A  +G  E V G V +  
Sbjct: 234  SGYLQTLDDFRQIPLQLSAKGVPITLGDVAHVQLGPEMRRGIAELDGEGETVGGVVILRS 293

Query: 299  GENSRTVSQAVDRKMQEINRTLPAGVKAVTVYDRTVLVDKAIATVKKNLFEGAVLVIAIL 358
            G+N+R    AV  K++E+ R+LP GV+ VT YDR+ L+D+A+  +   L E  ++V  + 
Sbjct: 294  GKNARETLAAVHGKLEELKRSLPKGVEIVTTYDRSQLIDRAVENLSFKLLEEFIVVALVC 353

Query: 359  FLFLGNIRAALITALVIPLSMLFTFTGMVNQKVSANLMSLG--ALDFGIIIDGAVVIVEN 416
             +FL ++R++L+  + +P+ +L  F  M  Q ++AN+MSLG  A+  G ++D AVV++EN
Sbjct: 354  GIFLWHLRSSLVAIVSLPIGILIAFAVMRYQGINANIMSLGGIAIAIGAMVDAAVVMIEN 413

Query: 417  CVRRL-AHAQAHKGRPLTRSERFHEVFAASQEARRPLLFGQLIIMIVYLPIFALTGVEGK 475
              ++  A   A+ GR L   E +  + +A++E    L F  LII + ++P+F L   EG+
Sbjct: 414  AHKKAEAWRHANPGRALAGDEHWRVMTSAAEEVGPALFFCLLIITLSFIPVFTLEAQEGR 473

Query: 476  LFHPMAFTVVIALLGAMILSITFIPAAVALFIGNKV-SEKENRLMVWAKRGYEPLLARVM 534
            LF P+AFT   A+  A  LS+T +P  +  +I  K+  E  N L     R Y P L  V+
Sbjct: 474  LFGPLAFTKTYAMAAAAGLSVTLVPVLMGYWIRGKLPDEARNPLNRGLIRVYRPALNTVL 533

Query: 535  GAKPLVITTAVVAVLLSGLLATRLGTEFVPSLSEGDFAIQALRIPGTSLTQSVEMQKQLE 594
                  I  AV+ +  +    +RLG EF+P + EGD       +PG S  ++ ++ +Q +
Sbjct: 534  DHPKTTIAVAVLVLATTLWPMSRLGGEFLPPMDEGDLLYMPSALPGLSAQKAAQLLQQTD 593

Query: 595  RTLKEKFPEIERIFARTGTAEIASDPMPPNISDGYIMLKPESEW---PKPRRSRAEVLAA 651
            R ++   PE+E +F + G AE A+DP P  + +  I  KP  +W     P +   E+  A
Sbjct: 594  RMIR-TVPEVETVFGKAGRAESATDPAPLEMFETTIRFKPREQWRAGMTPEKLVDELDRA 652

Query: 652  VQEEVEKLPGNNYEFSQPIQLRFNELISGVRSDVAVKIFGDDMDVLNKTAAEVSEALGKI 711
            VQ     +PG    +  PI+ R + L +G++S + VK+ G +++ +++ + +V     ++
Sbjct: 653  VQ-----VPGLTNIWIPPIRNRIDMLATGIKSPIGVKVAGANLEEIDRVSQQVEAVAKRV 707

Query: 712  AGAAEVKVEQTTGLPMLTVNIDRNKTARYGLNVGDVQEAISIAVGGREAGTLFDGDRRFD 771
             G +    E+  G   + ++IDR   ARYGLN+ DVQ  +S A+GG   G   +G  R+ 
Sbjct: 708  PGVSSALAERLVGGRYIDIDIDRRDAARYGLNIADVQSIVSSAIGGETVGETVEGLARYP 767

Query: 772  IIVRLPENLRTDLEAIKRLPVALPKGAGAEGARTSFIPLGEVATLDIAPGPNQVSREDGK 831
            I VR P   R   +A++ LP+  P+G        S I LG VA + ++ GP  +  E+ +
Sbjct: 768  ISVRYPREWRDTPQALEELPILTPQG--------SQITLGSVARVRVSDGPPMLRSENAR 819

Query: 832  RRIVVSANVRGRDLGSFVAEAEEAM-RNVKIPTGYWTVWGGQYENLASATQRLQVVVPVS 890
                V  +VRGRD+ S VA+   A+  +V +P G    + GQ+E L  A +RL++VVP +
Sbjct: 820  LAGWVYVDVRGRDIASVVADLRGAISADVALPPGMSLSYSGQFEFLERANERLKLVVPAT 879

Query: 891  LLLVFTLLFAMFGNLKDGLLVFTGIPFALTGGIVALWMRGIPLSISAAVGFIALSGVAVL 950
            LL++F LL+  F  L + +L+   +PFALTGG+  L++ G  LS++  VGFIAL+GVA  
Sbjct: 880  LLIIFVLLYLTFSRLDEAVLIMLTLPFALTGGVWFLYLMGYNLSVATGVGFIALAGVAAE 939

Query: 951  NGLVMISFIRNL----REGGLPLDA----AIREGALTRLRPVLMTALVASLGFVPMAIAT 1002
             G++M+ +++N     +  GL  +A    AIREGA+ R+RP  MT  V   G +P+ +  
Sbjct: 940  FGVIMLLYLKNAWAERQRDGLHDEAALCDAIREGAVQRVRPKAMTVAVIVAGLLPILLGA 999

Query: 1003 GTGAEVQRPLATVVIGGILSSTALTLLVLPLLYRIAHR 1040
            GTG+EV   +A  ++GG+LS+  L+L V+P +YR+  +
Sbjct: 1000 GTGSEVMSRIAAPMVGGMLSAPLLSLFVIPAVYRLMRK 1037