Pairwise Alignments

Query, 1070 a.a., Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA from Variovorax sp. SCN45

Subject, 1066 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  764 bits (1972), Expect = 0.0
 Identities = 434/1080 (40%), Positives = 649/1080 (60%), Gaps = 48/1080 (4%)

Query: 1    MFERIIRFSIEQRWLILLAVLGMAALGIFSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M +++I  ++  R ++L+ ++G  A       KL +DA PD+TNVQVQ+NTAA G +  E
Sbjct: 1    MLQKLIEQAVRSRLIVLIFLIGAMAAAAVMLPKLNLDAFPDVTNVQVQVNTAAEGLAAEE 60

Query: 61   TEQRVTYPIETVMAGLPGLQQTRSLSRYGLSQVTVIFKDGTDIYFARQLVNERIQSARES 120
             E+ ++YP+E+ M  LP + + RSLSR GLS VTV+F++GTDIYFARQ V E++Q+ARE+
Sbjct: 61   VEKLISYPVESAMYALPSVTEVRSLSRTGLSIVTVVFEEGTDIYFARQQVFEQLQAAREA 120

Query: 121  MPRGIS-PVIGPISTGLGEIYLWTVEAEEGARKADGKPYSSTDLREIQDWIIKPQLRNVA 179
            +P G+  P IGP ++GLG++Y + + A      A     +  +LR + D+++K  +  V 
Sbjct: 121  IPDGVGVPEIGPNTSGLGQVYQYILRA------APESGIAPDELRSLNDYLVKLIMMPVG 174

Query: 180  GVTEINSIGGYAKEFQISPDPAKLLAHGLTMTDLVTALERNNANVGAGYIEKRGEQYLIR 239
            GVT++ S GG  +++Q+  DPAKLL++GL + D+  ALE NN N G  ++ K  EQ ++R
Sbjct: 175  GVTDVLSFGGEVRQYQVQVDPAKLLSYGLKLDDVTRALEGNNRNAGGWFMAKGQEQLVVR 234

Query: 240  APGQVKS----VEDIGNVILGNANGIPLRVQDVAEVGIGKELRTGAATDNGR-------- 287
              G + +    ++ I  + L    G P+R+ DVA+V  G E+R GA T   R        
Sbjct: 235  GYGLLPAGEAGLDAIAQIPLTEWQGTPVRIMDVAQVAFGSEIRVGAVTMTRRDEAGSPQV 294

Query: 288  --EVVLGTVFMLIGENSRTVSQAVDRKMQEINRTLPAGVKAVTVYDRTVLVDKAIATVKK 345
              EVV G +   +G N++     ++ +   I + LP GV     YD++ LV KA+ TV+ 
Sbjct: 295  LGEVVAGVILKRMGANTKATIDDINSRTALIQQALPDGVTFEVFYDQSDLVTKAVTTVRD 354

Query: 346  NLFEGAVLVIAILFLFLGNIRAALITALVIPLSMLFTFTGMVNQKVSANLMSLG--ALDF 403
             L    + ++A+L LFL N+RA  +  L IP+S+      M    +SANLMSLG  A+  
Sbjct: 355  ALLLAFMFIVAVLALFLVNVRATALVLLSIPVSIALALMVMSYFGMSANLMSLGGLAVAI 414

Query: 404  GIIIDGAVVIVENCVRRLAHAQAH--KGRP----LTRSERFHE---------VFAASQEA 448
            G+++DG+VV+VEN  R L   +     G P    L+  +   E         +  A++E 
Sbjct: 415  GMLVDGSVVMVENIFRHLTQPEGRVDNGLPTDPGLSEEDAHREGGYGGIAMRILQAAREV 474

Query: 449  RRPLLFGQLIIMIVYLPIFALTGVEGKLFHPMAFTVVIALLGAMILSITFIPAAVALFIG 508
              P+ F  LII++V+ P+FAL GVEGKLF PMA ++++A+L A+++++  +PA       
Sbjct: 475  CSPIFFATLIIIVVFAPLFALEGVEGKLFQPMAVSIILAMLSALMVALVVVPALAVYLFR 534

Query: 509  NKVSEKENRLMVWAKRGYEPLLARVMGAKPLVITTAVVAVLLSGLLATRLGTEFVPSLSE 568
              V  +++ L+    +GY  +L  VM     V  TA+V   LS  L  RLGTEFVP L E
Sbjct: 535  RGVHLRQSPLLTPIDKGYRRVLGAVMARPKTVGITALVLFGLSMALLPRLGTEFVPELEE 594

Query: 569  GDFAIQALRIPGTSLTQSVEMQKQLERTLKEKFPEIERIFARTGTAEIASDPMPPNISDG 628
            G   ++    P  SL  S+ +  +LE  L E FPE++   +R G  E+  DP P +  + 
Sbjct: 595  GTINLRVTLAPTASLDTSLMVAPKLEAMLME-FPEVDYALSRIGAPELGGDPEPVSNIEI 653

Query: 629  YIMLKPESEWPKPRRSRAEVLAAVQEEVEKLPGNNYEFSQPIQLRFNELISGVRSDVAVK 688
            YI LKP  EW +   SRAE+   ++E++   PG  + FSQPI  R +EL+SGV++ +A+K
Sbjct: 654  YIGLKPIDEW-QSAASRAELQRLMEEKLSVFPGLLFTFSQPIATRVDELLSGVKAQLAIK 712

Query: 689  IFGDDMDVLNKTAAEVSEALGKIAGAAEVKVEQTTGLPMLTVNIDRNKTARYGLNVGDVQ 748
            +FG D+DVL +   ++SE + K+ GA +V +EQ +G   L V  DR + ARYG++V +V 
Sbjct: 713  LFGPDLDVLAEKGQQLSELVSKVPGAVDVSLEQVSGEAQLVVRPDRARLARYGISVDEVM 772

Query: 749  EAISIAVGGREAGTLFDGDRRFDIIVRLPENLRTDLEAIKRLPVALPKGAGAEGARTSFI 808
              +S  +GG +AG + DG+ R+DI VRL  + R   +AI  L +      GA GAR   +
Sbjct: 773  NLVSTGIGGSDAGQVIDGNARYDINVRLKADTRASADAIADLLLV-----GANGAR---V 824

Query: 809  PLGEVATLDIAPGPNQVSREDGKRRIVVSANVRGRDLGSFVAEAEEAMRNVKIPTGYWTV 868
             LGEVA + +   P  + R+D +RR+VV ANV GRD+GS V +    +    +P GY   
Sbjct: 825  RLGEVADVVVEMAPPNIRRDDVQRRVVVQANVSGRDMGSVVKDIYALVPEADLPPGYTVS 884

Query: 869  WGGQYENLASATQRLQVVVPVSLLLVFTLLFAMFGNLKDGLLVFTGIPFALTGGIVALWM 928
             GGQYEN   A  RL +VVPVS+ L+  LL+  FG LK   L+   +P AL GG+VAL++
Sbjct: 885  VGGQYENQQRAQARLMLVVPVSIGLIALLLYFSFGALKQVGLIMANVPLALIGGVVALYV 944

Query: 929  RGIPLSISAAVGFIALSGVAVLNGLVMISFIRNLREGGLPLDAAIREGALTRLRPVLMTA 988
             G  LS+ +++GFI L GVAVLNG+V++  I   R GG  L  A+ EG   RLRPVLMTA
Sbjct: 945  SGTYLSVPSSIGFITLFGVAVLNGVVLVDSINQRRAGGEGLYQAVYEGTAARLRPVLMTA 1004

Query: 989  LVASLGFVPMAIATGTGAEVQRPLATVVIGGILSSTALTLLVLPLLYRIAHRRDEEEAQQ 1048
            L ++LG +P+ +++G G+E+Q+PLA V+IGG+ SSTALTLLVLP LY   +R+++ E ++
Sbjct: 1005 LTSALGLIPILLSSGVGSEIQQPLAVVIIGGLFSSTALTLLVLPTLYMALYRQNDRELEE 1064