Pairwise Alignments

Query, 1070 a.a., Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA from Variovorax sp. SCN45

Subject, 1028 a.a., heavy metal efflux pump, cobalt-zinc-cadmium from Dechlorosoma suillum PS

 Score =  788 bits (2034), Expect = 0.0
 Identities = 442/1040 (42%), Positives = 643/1040 (61%), Gaps = 28/1040 (2%)

Query: 1    MFERIIRFSIEQRWLILLAVLGMAALGIFSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M  R++ FS+ QR L+L+    +   GI ++  LPIDA PD++  QV+I   APG +P E
Sbjct: 1    MLSRLVEFSLAQRLLMLVLTALLVGAGIMAFHNLPIDAFPDVSTTQVKIIMKAPGMTPEE 60

Query: 61   TEQRVTYPIETVMAGLPGLQQTRSLSRYGLSQVTVIFKDGTDIYFARQLVNERIQSARES 120
             E R+  PIE  M G+P  +  R+ S+Y ++ VT+ F+DGTDIY+ARQ V ER+      
Sbjct: 61   VEARIVVPIEQEMLGIPKQRILRTTSKYAIADVTIDFEDGTDIYWARQQVAERLGGVE-- 118

Query: 121  MPRGISPVIGPISTGLGEIYLWTVEAEEGARKADGKPYSSTDLREIQDWIIKPQLRNVAG 180
            +P G S  + PI+T L E++++TVE           P S  + R I DW I+PQLR + G
Sbjct: 119  LPPGASGGLAPITTPLSEMFMFTVEG----------PLSLEEKRTILDWTIRPQLRTLRG 168

Query: 181  VTEINSIGGYAKEFQISPDPAKLLAHGLTMTDLVTALERNNANVGAGYIEKRGEQYLIRA 240
            V ++NS+GG+AK F++ PD A L A G+++ +L  A+E NN N GAG + +  E  L+R 
Sbjct: 169  VADVNSLGGHAKAFEVVPDAAALNARGVSLNELRQAVEGNNRNDGAGRLTEGEETLLVRV 228

Query: 241  PGQVKSVEDIGNVILGNANGIPLRVQDVAEVGIGKELRTGAATDNGR-EVVLGTVFMLIG 299
             G V+S+ED+  +++    G P+RV DVAEV  G   R GA T +G+ E V G V  L G
Sbjct: 229  EGAVRSLEDLRAIVIAQRGGNPVRVGDVAEVRFGALTRYGAVTKDGQGEAVEGLVLGLRG 288

Query: 300  ENSRTVSQAVDRKMQEINRTLPAGVKAVTVYDRTVLVDKAIATVKKNLFEGAVLVIAILF 359
             N++ V   V  K+ EI  TLP GV  V  YDR  LV++A+ TV K L E  VLV+ +L 
Sbjct: 289  ANAQQVVDQVKAKLAEIQATLPEGVSIVPFYDRGHLVERAVGTVSKALGEAIVLVVILLL 348

Query: 360  LFLGNIRAALITALVIPLSMLFTFTGMVNQKVSANLMSLG--ALDFGIIIDGAVVIVENC 417
             FLGN+RAAL+ ++++PLS L TF  M    +SANLMSLG  A+  G+++D AVVIVEN 
Sbjct: 349  AFLGNLRAALVVSVILPLSALLTFILMQYFGLSANLMSLGGLAIAIGMLVDAAVVIVENV 408

Query: 418  VRRLAHAQAHKGRPLTRSERFHEVFAASQEARRPLLFGQLIIMIVYLPIFALTGVEGKLF 477
               L+        PL      H ++ + +E   P+  G  II+IV++P+  L G+EGKLF
Sbjct: 409  ESHLSSPHTSARLPL-----LHVIYRSVREVTVPVASGIAIIVIVFVPLLTLEGLEGKLF 463

Query: 478  HPMAFTVVIALLGAMILSITFIPAAVALFIGNKVSEKENRLMVWAKRGYEPLLARVMGAK 537
             P+A T+V AL+ +++L++T IPA  ++ +  +    E  L+      Y P L   +   
Sbjct: 464  IPVALTIVFALVSSLLLALTVIPALASMLM-QRGGHHEAWLVQKLNAAYAPALDWALAHT 522

Query: 538  PLVITTAVVAVLLSGLLATRLGTEFVPSLSEGDFAIQALRIPGTSLTQSVEMQKQLERTL 597
              V+  A+  ++L+    T LG  F+P++ EGD  IQ  ++P  SL ++VE  ++++R +
Sbjct: 523  RQVVVAALALLVLAIGAYTLLGKTFLPTMDEGDLIIQLEKLPSISLEETVETDQRVQRAI 582

Query: 598  KEKFPEIERIFARTGTAEIASDPMPPNISDGYIMLKPESEWPKPRRSRAEVLAAVQEEVE 657
             E+ PE++ I AR G+ E+  DPM  N +D +++LKP  EW +P +    +   +++ +E
Sbjct: 583  LERVPEVKNIIARVGSDELGLDPMGLNQTDTFLVLKPIDEWRQPDKDW--LTDQLRQVME 640

Query: 658  KLPGNNYEFSQPIQLRFNELISGVRSDVAVKIFGDDMDVLNKTAAEVSEALGKIAGAAEV 717
              PG  Y F+QPI +R +E+++GVR D+AVK+FG D+D LN  A  +   L  I GA +V
Sbjct: 641  DFPGIAYTFTQPIDMRISEMLTGVRGDIAVKVFGTDLDQLNHAADGIVALLKGIKGAEDV 700

Query: 718  KVEQTTGLPMLTVNIDRNKTARYGLNVGDVQEAISIAVGGREAGTLFDGDRRFDIIVRLP 777
               +  G+  L V IDR    R GL + DVQ A+   V G  AG + +  RR  +++R  
Sbjct: 701  FTLKNEGVQYLKVEIDRLAAGRLGLPIEDVQNALKTLVEGLPAGLVVEPGRRTPVLLRGG 760

Query: 778  ENLRTDLEAIKRLPVALPKGAGAEGARTSFIPLGEVATLDIAPGPNQVSREDGKRRIVVS 837
             + +T +E    L ++LP     EG     +PL +VA ++   GP +V RE+ +R +V+ 
Sbjct: 761  PDYKTSVERFADLRLSLP----GEGTNVRTVPLSQVAKIERVEGPVKVDRENAQRYVVIQ 816

Query: 838  ANVRGRDLGSFVAEAE-EAMRNVKIPTGYWTVWGGQYENLASATQRLQVVVPVSLLLVFT 896
            +NVR RDL  FV EA+ +  + +K+P GY  VWGGQ+EN   A QRL +VVPV+L L+F 
Sbjct: 817  SNVRDRDLVGFVEEAQAKVAQQLKLPQGYRIVWGGQFENQQRAAQRLMLVVPVALGLIFM 876

Query: 897  LLFAMFGNLKDGLLVFTGIPFALTGGIVALWMRGIPLSISAAVGFIALSGVAVLNGLVMI 956
            LLF+ FG+L+   LV   IPFAL GG+ AL + G  LS+ A+VGFIAL G+AVLNG+VM+
Sbjct: 877  LLFSTFGSLRQAGLVLAMIPFALVGGVFALLLSGQYLSVPASVGFIALLGIAVLNGVVML 936

Query: 957  SFIRNLREGGLPLDAAIREGALTRLRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVV 1016
            ++   LR  GLPL+  +REGA  RLRPVLMTA +A+ G VP+  A+G G+E+Q+PLA VV
Sbjct: 937  TYFNQLRTQGLPLEQVVREGARRRLRPVLMTASIAAFGLVPLLFASGPGSEIQKPLAIVV 996

Query: 1017 IGGILSSTALTLLVLPLLYR 1036
            IGG+LSST LTLL+LP+LYR
Sbjct: 997  IGGLLSSTLLTLLLLPILYR 1016



 Score = 47.0 bits (110), Expect = 7e-09
 Identities = 66/331 (19%), Positives = 133/331 (40%), Gaps = 19/331 (5%)

Query: 741  GLNVGDVQEAISIAVGGREAGTLFDGDRRFDIIVRLPENLRTDLEAIKRLPVALPKGAGA 800
            G+++ ++++A+        AG L +G+    ++VR+   +R+ LE ++ + +A   G   
Sbjct: 195  GVSLNELRQAVEGNNRNDGAGRLTEGEET--LLVRVEGAVRS-LEDLRAIVIAQRGGNPV 251

Query: 801  EGARTSFIPLGEVATLDIAPGPNQVSREDGKRRIVVSANVRGRDLGSFVAEAEEAMRNVK 860
                 + +  G +          Q    +G     +   +RG +    V + +  +  ++
Sbjct: 252  RVGDVAEVRFGALTRYGAVTKDGQGEAVEG-----LVLGLRGANAQQVVDQVKAKLAEIQ 306

Query: 861  --IPTGYWTVWGGQYENLAS-ATQRLQVVVPVSLLLVFTLLFAMFGNLKDGLLVFTGIPF 917
              +P G   V      +L   A   +   +  +++LV  LL A  GNL+  L+V   +P 
Sbjct: 307  ATLPEGVSIVPFYDRGHLVERAVGTVSKALGEAIVLVVILLLAFLGNLRAALVVSVILPL 366

Query: 918  ALTGGIVALWMRGIPLSISAAVGFIALSGVAVLNGLVMISFIRNL-----REGGLPLDAA 972
            +     + +   G+  ++ +  G     G+ V   +V++  + +          LPL   
Sbjct: 367  SALLTFILMQYFGLSANLMSLGGLAIAIGMLVDAAVVIVENVESHLSSPHTSARLPLLHV 426

Query: 973  IREGALTRLRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGILSSTALTLLVLP 1032
            I         PV     +  + FVP+    G   ++  P+A  ++  ++SS  L L V+P
Sbjct: 427  IYRSVREVTVPVASGIAIIVIVFVPLLTLEGLEGKLFIPVALTIVFALVSSLLLALTVIP 486

Query: 1033 LLYRIAHRRDEEEAQQEDTREQNHGAPLAPA 1063
             L  +  +R       E    Q   A  APA
Sbjct: 487  ALASMLMQRG---GHHEAWLVQKLNAAYAPA 514