Pairwise Alignments

Query, 1070 a.a., Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA from Variovorax sp. SCN45

Subject, 1070 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella sp. ANA-3

 Score =  763 bits (1970), Expect = 0.0
 Identities = 432/1086 (39%), Positives = 650/1086 (59%), Gaps = 56/1086 (5%)

Query: 1    MFERIIRFSIEQRWLILLAVLGMAALGIFSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M ++ I  +I+ R L++LA+L + A  +    KL +DA PD+TNVQV INTAA G +  E
Sbjct: 1    MLQKAIEAAIKNRLLVVLALLAVVAASVAMLPKLNLDAFPDVTNVQVTINTAAEGLAAEE 60

Query: 61   TEQRVTYPIETVMAGLPGLQQTRSLSRYGLSQVTVIFKDGTDIYFARQLVNERIQSARES 120
             E+ ++YP+E+ M  LP + + RSLSR GLS VTV+F +GTDIYFARQ V E++Q+ARE 
Sbjct: 61   VEKLISYPVESAMYALPAVTEVRSLSRTGLSIVTVVFAEGTDIYFARQQVFEQLQAAREM 120

Query: 121  MPRGIS-PVIGPISTGLGEIYLWTVEAEEGARKADGKPYSSTDLREIQDWIIKPQLRNVA 179
            +P G+  P IGP ++GLG+IY + + A+  +        ++ +LR + D+++K  +  V 
Sbjct: 121  IPSGVGVPEIGPNTSGLGQIYQYILRADPSSG------INAAELRSLNDYLVKLIMMPVG 174

Query: 180  GVTEINSIGGYAKEFQISPDPAKLLAHGLTMTDLVTALERNNANVGAGYIEKRGEQYLIR 239
            GVT++ S GG  +++Q+  DP KL A+GL+M  +  ALE NN N G  ++++  EQ ++R
Sbjct: 175  GVTDVLSFGGEVRQYQVQVDPNKLRAYGLSMAQVSEALESNNRNAGGWFMDQGQEQLVVR 234

Query: 240  APGQVKSVED----IGNVILGNANGIPLRVQDVAEVGIGKELRTGAATDNGR-------- 287
              G + + E     I  + L    G P+RV D+A+V  G E+R GA T   R        
Sbjct: 235  GYGMLPAGEAGLAAIAQIPLTEVRGTPVRVGDIAQVDFGSEIRVGAVTMTRRDEAGQAQD 294

Query: 288  --EVVLGTVFMLIGENSRTVSQAVDRKMQEINRTLPAGVKAVTVYDRTVLVDKAIATVKK 345
              EVV G V   +G N++     +D ++  I + LP GV     YD+  LVDKA+ TV+ 
Sbjct: 295  LGEVVAGVVLKRMGANTKATIDDIDARINLIEQALPKGVSFEVFYDQADLVDKAVTTVRD 354

Query: 346  NLFEGAVLVIAILFLFLGNIRAALITALVIPLSMLFTFTGMVNQKVSANLMSLG--ALDF 403
             L    V ++ IL LFL NIRA L+  L IP+S+      M    +SANLMSLG  A+  
Sbjct: 355  ALLMAFVFIVVILALFLVNIRATLLVLLSIPVSIGLALMVMSYYGLSANLMSLGGLAVAI 414

Query: 404  GIIIDGAVVIVENCVRRLA-----HAQAHKGRPLTRSERFH------------------E 440
            G+++DG+VV+VEN  + L      H    + R     + +H                   
Sbjct: 415  GMLVDGSVVMVENIFKHLTQPDRRHLAQARSRADGEVDPYHGDEDGSAHAVEADNNMAVR 474

Query: 441  VFAASQEARRPLLFGQLIIMIVYLPIFALTGVEGKLFHPMAFTVVIALLGAMILSITFIP 500
            +  A++E   P+ F   II++V+ P+FAL GVEGKLF PMA ++++A++ A+++++  +P
Sbjct: 475  IMLAAKEVCSPIFFATAIIIVVFAPLFALEGVEGKLFQPMAVSIILAMISALLVALIAVP 534

Query: 501  AAVALFIGNKVSEKENRLMVWAKRGYEPLLARVMGAKPLVITTAVVAVLLSGLLATRLGT 560
            A         V  KE+ ++      Y  LL+  +    LV+T+A++   +S +L  RLGT
Sbjct: 535  ALAVYLFKRGVVLKESVVLAPLDSAYRKLLSATLARPKLVMTSALLMFAMSMVLLPRLGT 594

Query: 561  EFVPSLSEGDFAIQALRIPGTSLTQSVEMQKQLERTLKEKFPEIERIFARTGTAEIASDP 620
            EFVP L EG   ++    P  SL  S+++  +LE  L E FPE+E   +R G  E+  DP
Sbjct: 595  EFVPELEEGTINLRVTLAPTASLGTSLDVAPKLEAMLLE-FPEVEYALSRIGAPELGGDP 653

Query: 621  MPPNISDGYIMLKPESEWPKPRRSRAEVLAAVQEEVEKLPGNNYEFSQPIQLRFNELISG 680
             P +  + YI LKP  EW +   SR E+   ++E++   PG    FSQPI  R +EL+SG
Sbjct: 654  EPVSNIEVYIGLKPIEEW-QSASSRLELQRLMEEKLSVFPGLLLTFSQPIATRVDELLSG 712

Query: 681  VRSDVAVKIFGDDMDVLNKTAAEVSEALGKIAGAAEVKVEQTTGLPMLTVNIDRNKTARY 740
            V++ +A+K+FG D+DVL++    +++ + KI GA +V +EQ +G   L V  DR + ARY
Sbjct: 713  VKAQLAIKLFGPDLDVLSEKGQVLTDLVAKIPGAVDVSLEQVSGEAQLVVRPDRAQLARY 772

Query: 741  GLNVGDVQEAISIAVGGREAGTLFDGDRRFDIIVRLPENLRTDLEAIKRLPVALPKGAGA 800
            G++V  V   +S  +GG  AG + DG+ R+DI +RL    R+  + IK L ++     G+
Sbjct: 773  GISVDQVMSLVSQGIGGASAGQVIDGNARYDINLRLAAQYRSSPDVIKDLLLS-----GS 827

Query: 801  EGARTSFIPLGEVATLDIAPGPNQVSREDGKRRIVVSANVRGRDLGSFVAEAEEAMRNVK 860
             GA    + LGEVA++++   P  + R+D +RR+VV ANV GRD+GS V +    +    
Sbjct: 828  NGAT---VRLGEVASVEVEMAPPNIRRDDVQRRVVVQANVAGRDMGSVVKDIYALVPQAD 884

Query: 861  IPTGYWTVWGGQYENLASATQRLQVVVPVSLLLVFTLLFAMFGNLKDGLLVFTGIPFALT 920
            +P GY  + GGQYEN   A Q+L +VVP+S+ L+  LL+  FG +K  LL+   +P AL 
Sbjct: 885  LPAGYTVIVGGQYENQQRAQQKLMLVVPISIALIALLLYFSFGAVKQVLLIMANVPLALI 944

Query: 921  GGIVALWMRGIPLSISAAVGFIALSGVAVLNGLVMISFIRNLREGGLPLDAAIREGALTR 980
            GGIVAL++ G  LS+ +++GFI L GVAVLNG+V++  I   R+ G  L  ++ EG + R
Sbjct: 945  GGIVALFVSGTYLSVPSSIGFITLFGVAVLNGVVLVDSINQRRQSGESLYDSVYEGTVGR 1004

Query: 981  LRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGILSSTALTLLVLPLLYRIAHR 1040
            LRPVLMTAL ++LG +P+ +++G G+E+Q+PLA V+IGG+ SSTALTLLVLP LYR  +R
Sbjct: 1005 LRPVLMTALTSALGLIPILVSSGVGSEIQKPLAVVIIGGLFSSTALTLLVLPTLYRWLYR 1064

Query: 1041 RDEEEA 1046
             D+  A
Sbjct: 1065 HDKSSA 1070