Pairwise Alignments

Query, 359 a.a., Small-conductance mechanosensitive channel from Variovorax sp. SCN45

Subject, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 30/224 (13%)

Query: 97  LAVRAISGFAEGVLAQNPSD--VADNLHARRVLTQTRVLARTAMTVVLVAGGAMMLMTFP 154
           L V+ ++G    VL +   D  V D +H         ++  T   +VL+A  + +     
Sbjct: 49  LVVKGVAGSVANVLKKKEMDKAVVDFIHG--------LVRYTLFIIVLIAALSRI----- 95

Query: 155 GARQVGASLLASAGVIGIVAGLAAKPVFSNLIAGLQIALAQPIRIDDVLVVEGEWGRVEE 214
           G +   AS++A  G  G+  GLA +   SN  AG+ I   +P +  D + + G  G V+ 
Sbjct: 96  GVQT--ASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIGGVAGSVDS 153

Query: 215 ITGTFVVIKIWDERRLILPLTYFIEKPFQNWTRHSSQLLGAVFIYADYGMPLAPLREEVE 274
           I     V+K  D + +++P +  I     N++RH ++ +  V      G+      ++ +
Sbjct: 154 IQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVI-----GVSYKSDLQKTK 208

Query: 275 RIVKSSSEWDGRFFNLRVTDATERTMQIRVLCTAATSGLAFDLR 318
           R+++ + E D R          +  M I VL T A S + F +R
Sbjct: 209 RVLRETLEKDPRILK-------DPDMTIGVL-TLADSSINFVVR 244