Pairwise Alignments

Query, 359 a.a., Small-conductance mechanosensitive channel from Variovorax sp. SCN45

Subject, 1134 a.a., MscS Mechanosensitive ion channel from Pseudomonas syringae pv. syringae B728a

 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 4/164 (2%)

Query: 109  VLAQNPSDVADNLHARRV-LTQTRVLARTAMTVVLVAG-GAMMLMTFPGARQVGASLLAS 166
            VLA N   + + L   R+ L Q    A T +    +AG G +  ++  G        L +
Sbjct: 846  VLAGNLPGLLEVLVLSRMNLAQGSAYATTTLLSYTIAGVGFVTTLSTLGVSWDKLQWLVA 905

Query: 167  AGVIGIVAGLAAKPVFSNLIAGLQIALAQPIRIDDVLVVEGEWGRVEEITGTFVVIKIWD 226
            A  +G+  G   + +F+N I+G+ I   +P+RI D + +    G V +I      I  +D
Sbjct: 906  ALSVGL--GFGMQEIFANFISGIMILFERPVRIGDTITIGALSGTVSKIRIRATTITDFD 963

Query: 227  ERRLILPLTYFIEKPFQNWTRHSSQLLGAVFIYADYGMPLAPLR 270
             + +I+P   FI     NW+   +     + +  DYG  L  +R
Sbjct: 964  RKDIIVPNKTFITGQLINWSLTDTVTRVTLKLGVDYGSDLDLVR 1007